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Diego thermodynamic fix #372

Diego thermodynamic fix

Diego thermodynamic fix #372

# This workflow will install Python dependencies, run tests and lint with a variety of Python versions
# For more information see: https://help.github.com/actions/language-and-framework-guides/using-python-with-github-actions
name: Python package
on:
push:
branches: [ master ]
pull_request:
branches: [ master ]
jobs:
build:
runs-on: ubuntu-latest
strategy:
matrix:
python-version: [3.8]
services:
rabbitmq:
image: rabbitmq:latest
ports:
- 5672:5672
steps:
- uses: actions/checkout@v2
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v2
with:
python-version: ${{ matrix.python-version }}
- name: Install dependencies
run: |
python -m pip install --upgrade pip
pip install flake8 pytest~=6.0 pgtest~=1.3 aiida-core~=2.3 aiida-quantumespresso~=4.3
if [ ${{matrix.python-version}} -eq 2.7 ]; then pip install -r requirements2.txt;
else pip install -r requirements.txt; fi
aiida-pseudo install
- name: Lint with flake8
run: |
# stop the build if there are Python syntax errors or undefined names
flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics
# exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide
flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics
- name: Install
run: |
sudo apt-get update
sudo apt-get install git gfortran libblas-dev liblapack-dev
git clone https://github.com/mesonepigreco/CellConstructor.git
cd CellConstructor
python setup.py install --user
cd ..
python setup.py install --user
# Install julia requirements
python -c 'import julia; julia.install()'
- name: Test with pytest
env:
OMP_NUM_THREADS: 1
run: |
cd tests
rm -rf __pycache__
# Test excluding very long running tests
pytest -v -m "not release"