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update LIDO-tutorial
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@RodionLisch
RodionLisch committed Nov 28, 2024
1 parent 6b8ea01 commit 0aaf71e
Showing 1 changed file with 28 additions and 5 deletions.
33 changes: 28 additions & 5 deletions nfdinspector_tutorials/LIDO_tutorial.ipynb
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Original file line number Diff line number Diff line change
Expand Up @@ -82,7 +82,7 @@
},
{
"cell_type": "code",
"execution_count": null,
"execution_count": 1,
"metadata": {},
"outputs": [],
"source": [
Expand All @@ -102,11 +102,34 @@
},
{
"cell_type": "code",
"execution_count": null,
"execution_count": 12,
"metadata": {},
"outputs": [],
"outputs": [
{
"ename": "OSError",
"evalue": "Error reading file '\\nfdinspector_tutorials\\LIDO_xml\\23318.xml': failed to load external entity \"/nfdinspector_tutorials/LIDO_xml/23318.xml\"",
"output_type": "error",
"traceback": [
"\u001b[1;31m---------------------------------------------------------------------------\u001b[0m",
"\u001b[1;31mOSError\u001b[0m Traceback (most recent call last)",
"Cell \u001b[1;32mIn[12], line 2\u001b[0m\n\u001b[0;32m 1\u001b[0m file_path \u001b[38;5;241m=\u001b[39m \u001b[38;5;124m'\u001b[39m\u001b[38;5;130;01m\\\\\u001b[39;00m\u001b[38;5;124mnfdinspector_tutorials\u001b[39m\u001b[38;5;130;01m\\\\\u001b[39;00m\u001b[38;5;124mLIDO_xml\u001b[39m\u001b[38;5;130;01m\\\\\u001b[39;00m\u001b[38;5;124m23318.xml\u001b[39m\u001b[38;5;124m'\u001b[39m\n\u001b[1;32m----> 2\u001b[0m \u001b[43mlido_inspector\u001b[49m\u001b[38;5;241;43m.\u001b[39;49m\u001b[43mread_lido_file\u001b[49m\u001b[43m(\u001b[49m\u001b[43mfile_path\u001b[49m\u001b[43m)\u001b[49m\n",
"File \u001b[1;32m~\\AppData\\Roaming\\Python\\Python312\\site-packages\\nfdinspector\\lido_inspector.py:137\u001b[0m, in \u001b[0;36mLIDOInspector.read_lido_file\u001b[1;34m(self, file_path)\u001b[0m\n\u001b[0;32m 130\u001b[0m \u001b[38;5;28;01mdef\u001b[39;00m \u001b[38;5;21mread_lido_file\u001b[39m(\u001b[38;5;28mself\u001b[39m, file_path: \u001b[38;5;28mstr\u001b[39m) \u001b[38;5;241m-\u001b[39m\u001b[38;5;241m>\u001b[39m \u001b[38;5;28;01mNone\u001b[39;00m:\n\u001b[0;32m 131\u001b[0m \u001b[38;5;250m \u001b[39m\u001b[38;5;124;03m\"\"\"\u001b[39;00m\n\u001b[0;32m 132\u001b[0m \u001b[38;5;124;03m Parse LIDO-XML from a file and assign LIDO records to the inspector.\u001b[39;00m\n\u001b[0;32m 133\u001b[0m \n\u001b[0;32m 134\u001b[0m \u001b[38;5;124;03m :param file_path: File path to a LIDO-XML file\u001b[39;00m\n\u001b[0;32m 135\u001b[0m \u001b[38;5;124;03m :type file_path: str\u001b[39;00m\n\u001b[0;32m 136\u001b[0m \u001b[38;5;124;03m \"\"\"\u001b[39;00m\n\u001b[1;32m--> 137\u001b[0m xml_root \u001b[38;5;241m=\u001b[39m \u001b[43mMetadataInspector\u001b[49m\u001b[38;5;241;43m.\u001b[39;49m\u001b[43mread_xml_file\u001b[49m\u001b[43m(\u001b[49m\u001b[43mfile_path\u001b[49m\u001b[43m)\u001b[49m\n\u001b[0;32m 138\u001b[0m \u001b[38;5;28mself\u001b[39m\u001b[38;5;241m.\u001b[39mlido_objects \u001b[38;5;241m=\u001b[39m [obj \u001b[38;5;28;01mfor\u001b[39;00m obj \u001b[38;5;129;01min\u001b[39;00m xml_root\u001b[38;5;241m.\u001b[39miter(\u001b[38;5;124m\"\u001b[39m\u001b[38;5;124m{\u001b[39m\u001b[38;5;124m*}lido\u001b[39m\u001b[38;5;124m\"\u001b[39m)]\n",
"File \u001b[1;32m~\\AppData\\Roaming\\Python\\Python312\\site-packages\\nfdinspector\\metadata_inspector.py:77\u001b[0m, in \u001b[0;36mMetadataInspector.read_xml_file\u001b[1;34m(file_path)\u001b[0m\n\u001b[0;32m 68\u001b[0m \u001b[38;5;250m\u001b[39m\u001b[38;5;124;03m\"\"\"\u001b[39;00m\n\u001b[0;32m 69\u001b[0m \u001b[38;5;124;03mParse XML from a file.\u001b[39;00m\n\u001b[0;32m 70\u001b[0m \n\u001b[1;32m (...)\u001b[0m\n\u001b[0;32m 74\u001b[0m \u001b[38;5;124;03m:rtype: etree._Element\u001b[39;00m\n\u001b[0;32m 75\u001b[0m \u001b[38;5;124;03m\"\"\"\u001b[39;00m\n\u001b[0;32m 76\u001b[0m parser \u001b[38;5;241m=\u001b[39m etree\u001b[38;5;241m.\u001b[39mXMLParser(remove_blank_text\u001b[38;5;241m=\u001b[39m\u001b[38;5;28;01mTrue\u001b[39;00m, ns_clean\u001b[38;5;241m=\u001b[39m\u001b[38;5;28;01mTrue\u001b[39;00m)\n\u001b[1;32m---> 77\u001b[0m \u001b[38;5;28;01mreturn\u001b[39;00m \u001b[43metree\u001b[49m\u001b[38;5;241;43m.\u001b[39;49m\u001b[43mparse\u001b[49m\u001b[43m(\u001b[49m\u001b[43mfile_path\u001b[49m\u001b[43m,\u001b[49m\u001b[43m \u001b[49m\u001b[43mparser\u001b[49m\u001b[43m)\u001b[49m\u001b[38;5;241m.\u001b[39mgetroot()\n",
"File \u001b[1;32msrc\\\\lxml\\\\etree.pyx:3590\u001b[0m, in \u001b[0;36mlxml.etree.parse\u001b[1;34m()\u001b[0m\n",
"File \u001b[1;32msrc\\\\lxml\\\\parser.pxi:1952\u001b[0m, in \u001b[0;36mlxml.etree._parseDocument\u001b[1;34m()\u001b[0m\n",
"File \u001b[1;32msrc\\\\lxml\\\\parser.pxi:1978\u001b[0m, in \u001b[0;36mlxml.etree._parseDocumentFromURL\u001b[1;34m()\u001b[0m\n",
"File \u001b[1;32msrc\\\\lxml\\\\parser.pxi:1881\u001b[0m, in \u001b[0;36mlxml.etree._parseDocFromFile\u001b[1;34m()\u001b[0m\n",
"File \u001b[1;32msrc\\\\lxml\\\\parser.pxi:1200\u001b[0m, in \u001b[0;36mlxml.etree._BaseParser._parseDocFromFile\u001b[1;34m()\u001b[0m\n",
"File \u001b[1;32msrc\\\\lxml\\\\parser.pxi:633\u001b[0m, in \u001b[0;36mlxml.etree._ParserContext._handleParseResultDoc\u001b[1;34m()\u001b[0m\n",
"File \u001b[1;32msrc\\\\lxml\\\\parser.pxi:743\u001b[0m, in \u001b[0;36mlxml.etree._handleParseResult\u001b[1;34m()\u001b[0m\n",
"File \u001b[1;32msrc\\\\lxml\\\\parser.pxi:670\u001b[0m, in \u001b[0;36mlxml.etree._raiseParseError\u001b[1;34m()\u001b[0m\n",
"\u001b[1;31mOSError\u001b[0m: Error reading file '\\nfdinspector_tutorials\\LIDO_xml\\23318.xml': failed to load external entity \"/nfdinspector_tutorials/LIDO_xml/23318.xml\""
]
}
],
"source": [
"lido_inspector.read_lido_file('file_path')"
"file_path = '\\\\nfdinspector_tutorials\\\\LIDO_xml\\\\23318.xml'\n",
"lido_inspector.read_lido_file(file_path)"
]
},
{
Expand All @@ -129,7 +152,7 @@
"metadata": {},
"outputs": [],
"source": [
"lido_inspector.read_lido_files('files_path')"
"lido_inspector.read_lido_files('nfdinspector_tutorials\\LIDO_xml')"
]
},
{
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