call correct which= in sys.call() (#6255) #310
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| # permissions and concurrency settings for GitHub Pages | |
| permissions: | |
| contents: read | |
| pages: write | |
| id-token: write | |
| concurrency: | |
| group: "pages" | |
| cancel-in-progress: true | |
| on: | |
| push: | |
| branches: | |
| - 'master' | |
| jobs: | |
| build: | |
| name: data.table | |
| environment: | |
| name: github-pages | |
| url: ${{ steps.deployment.outputs.page_url }} | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - uses: r-lib/actions/setup-pandoc@v2 | |
| - uses: r-lib/actions/setup-r@v2 | |
| - name: cache-r-dependencies | |
| uses: actions/cache@v3 | |
| with: | |
| path: ${{ env.R_LIBS_USER }}/* | |
| key: library-cache-${{ github.run_id }} | |
| restore-keys: library-cache | |
| - name: setup-os-dependencies | |
| run: | | |
| sudo apt-get install -y libcurl4-openssl-dev | |
| - name: setup-r-dependencies | |
| run: | | |
| Rscript -e 'stopifnot(file.copy("DESCRIPTION", file.path(tdir<-tempdir(), "PACKAGES"))); db<-available.packages(paste0("file://", tdir)); deps<-setdiff(tools::package_dependencies(read.dcf("DESCRIPTION", fields="Package")[[1L]], db, which="most")[[1L]], installed.packages(priority="high")[,"Package"]); if (length(deps)) { ap<-available.packages()[,"Version"]; ap<-ap[names(ap) %in% deps]; if (!all(deps%in%names(ap))) stop("dependencies are not avaiable in repository: ",paste(setdiff(deps, names(ap)), collapse=", ")); ip<-installed.packages()[,"Version"]; ip<-ip[names(ip) %in% deps]; pkgs<-ap[deps]>ip[deps]; install.packages(names(pkgs[pkgs|is.na(pkgs)]), INSTALL_opts="--html") }' | |
| - name: build | |
| run: | | |
| echo "Revision:" $GITHUB_SHA >> ./DESCRIPTION | |
| R CMD build . | |
| - name: check | |
| run: | | |
| R CMD check --as-cran --no-manual $(ls -1t data.table_*.tar.gz | head -n 1) | |
| - name: manual | |
| if: github.ref == 'refs/heads/master' | |
| run: | | |
| cp -R ${{ env.R_LIBS_USER }} library | |
| R CMD INSTALL --library="library" $(ls -1t data.table_*.tar.gz | head -n 1) --html | |
| mkdir -p doc/html | |
| cp /usr/share/R/doc/html/{left.jpg,up.jpg,Rlogo.svg,R.css,index.html} doc/html | |
| Rscript -e 'utils::make.packages.html("library", docdir="doc")' | |
| sed -i "s|file://|../..|g" doc/html/packages.html | |
| mkdir -p public | |
| mv doc public/doc | |
| cp -r --parents library/*/{html,help,doc,demo,DESCRIPTION,README,NEWS,README.md,NEWS.md} public 2>/dev/null || : | |
| sed -i 's|"/doc/html/|"/data.table/doc/html/|g' public/library/data.table/doc/index.html 2>/dev/null || : | |
| - name: repo | |
| if: github.ref == 'refs/heads/master' | |
| run: | | |
| mkdir -p public/src/contrib | |
| mv $(ls -1t data.table_*.tar.gz | head -n 1) public/src/contrib | |
| Rscript -e 'tools::write_PACKAGES("public/src/contrib", fields="Revision")' | |
| - name: upload | |
| if: github.ref == 'refs/heads/master' | |
| uses: actions/upload-pages-artifact@v1 | |
| with: | |
| path: "public" | |
| - name: deploy | |
| if: github.ref == 'refs/heads/master' | |
| id: deployment | |
| uses: actions/deploy-pages@v1 |