Bump PyTorch to 1.13

setup.py

@@ -10,7 +10,7 @@
     "url": "https://github.com/RasmussenLab/vamb",
     "author": "Jakob Nybo Nissen and Simon Rasmussen",
     "author_email": "[email protected]",
-    "version": "3.0.8",
+    "version": "3.0.9",
     "license": "MIT",
     "packages": find_packages(),
     "package_data": {"vamb": ["kernel.npz"]},
@@ -22,7 +22,7 @@
     "ext_modules": [Extension("vamb._vambtools",
                                sources=["src/_vambtools.pyx"],
                                language="c")],
-    "install_requires": ["numpy>=1.20", "torch>=1.8", "pysam>=0.14"],
+    "install_requires": ["numpy>=1.20", "torch>=1.13", "pysam>=0.14"],
     "setup_requires": ['Cython>=0.29', "setuptools>=58.0"],
     "python_requires": ">=3.5",
     "classifiers":[

vamb/__init__.py

@@ -21,7 +21,7 @@
 
 __authors__ = 'Jakob Nybo Nissen', 'Simon Rasmussen'
 __licence__ = 'MIT'
-__version__ = (3, 0, 8)
+__version__ = (3, 0, 9)
 
 import sys as _sys
 if _sys.version_info[:2] < (3, 5):

workflow/envs/vamb.yaml

@@ -10,4 +10,4 @@ dependencies:
   - cudatoolkit=10.2
   - pysam
   - pip:
-     - git+https://github.com/RasmussenLab/[email protected].8
+     - git+https://github.com/RasmussenLab/[email protected].9