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ubuntu-focal

ubuntu-focal #969

Workflow file for this run

name: Ubuntu 20.04 (GCC, Python, ROCm, MPICH, OpenMPI)
run-name: ubuntu-focal
on:
push:
branches: [ main, develop ]
paths-ignore:
- '*.md'
- 'source/docs/**'
- 'source/python/gui/**'
pull_request:
branches: [ main, develop ]
paths-ignore:
- '*.md'
- 'source/docs/**'
- 'source/python/gui/**'
concurrency:
group: ${{ github.workflow }}-${{ github.ref }}
cancel-in-progress: true
env:
OMNITRACE_CI: ON
OMNITRACE_TMPDIR: "%env{PWD}%/testing-tmp"
jobs:
ubuntu-focal-external:
runs-on: ubuntu-20.04
container:
image: jrmadsen/omnitrace:ci-base-ubuntu-20.04
strategy:
fail-fast: false
matrix:
compiler: ['g++-7', 'g++-8']
lto: ['OFF']
strip: ['OFF']
python: ['ON']
build-type: ['Release']
mpi-headers: ['OFF']
static-libgcc: ['OFF']
static-libstdcxx: ['OFF']
include:
- compiler: 'g++-9'
lto: 'OFF'
strip: 'ON'
python: 'OFF'
build-type: 'Release'
mpi-headers: 'ON'
static-libgcc: 'ON'
static-libstdcxx: 'ON'
- compiler: 'g++-10'
lto: 'OFF'
strip: 'ON'
python: 'ON'
build-type: 'Release'
mpi-headers: 'ON'
static-libgcc: 'ON'
static-libstdcxx: 'OFF'
- compiler: 'g++-11'
lto: 'ON'
strip: 'ON'
python: 'OFF'
build-type: 'Release'
mpi-headers: 'ON'
static-libgcc: 'ON'
static-libstdcxx: 'OFF'
steps:
- uses: actions/checkout@v3
- name: Install Packages
timeout-minutes: 25
uses: nick-fields/retry@v2
with:
retry_wait_seconds: 30
timeout_minutes: 25
max_attempts: 5
command: |
apt-get update &&
apt-get install -y software-properties-common &&
add-apt-repository -y ppa:ubuntu-toolchain-r/test &&
apt-get update &&
apt-get upgrade -y &&
apt-get install -y build-essential m4 autoconf libtool python3-pip libiberty-dev clang libmpich-dev mpich environment-modules ${{ matrix.compiler }} &&
python3 -m pip install --upgrade pip &&
python3 -m pip install numpy &&
python3 -m pip install perfetto &&
python3 -m pip install 'cmake==3.16.3' &&
for i in 6 7 8 9 10; do /opt/conda/envs/py3.${i}/bin/python -m pip install numpy perfetto dataclasses; done
- name: Test Environment Modules
timeout-minutes: 15
shell: bash
run: |
set -v
source /usr/share/modules/init/$(basename ${SHELL})
module avail
- name: Configure Env
run:
echo "CC=$(echo '${{ matrix.compiler }}' | sed 's/+/c/g')" >> $GITHUB_ENV &&
echo "CXX=${{ matrix.compiler }}" >> $GITHUB_ENV
- name: Configure, Build, and Test
timeout-minutes: 115
shell: bash
run:
git config --global --add safe.directory ${PWD} &&
TAG="" &&
append-tagname() { if [ "${1}" == "ON" ]; then TAG="${TAG}-${2}"; fi; } &&
append-tagname ${{ matrix.lto }} lto &&
append-tagname ${{ matrix.strip }} strip &&
append-tagname ${{ matrix.python }} python &&
append-tagname ${{ matrix.mpi-headers }} mpip &&
append-tagname ${{ matrix.static-libgcc }} libgcc &&
append-tagname ${{ matrix.static-libstdcxx }} libstdcxx &&
cmake --version &&
python3 ./scripts/run-ci.py -B build
--name ${{ github.repository_owner }}-${{ github.ref_name }}-ubuntu-focal-${{ matrix.compiler }}${TAG}
--build-jobs 2
--site GitHub
--
-DCMAKE_C_COMPILER=$(echo '${{ matrix.compiler }}' | sed 's/+/c/g')
-DCMAKE_CXX_COMPILER=${{ matrix.compiler }}
-DCMAKE_BUILD_TYPE=${{ matrix.build-type }}
-DCMAKE_INSTALL_PREFIX=/opt/omnitrace
-DOMNITRACE_BUILD_TESTING=ON
-DOMNITRACE_USE_MPI=OFF
-DOMNITRACE_USE_HIP=OFF
-DOMNITRACE_USE_OMPT=OFF
-DOMNITRACE_USE_PAPI=OFF
-DOMNITRACE_USE_PYTHON=${{ matrix.python }}
-DOMNITRACE_USE_MPI_HEADERS=${{ matrix.mpi-headers }}
-DOMNITRACE_STRIP_LIBRARIES=${{ matrix.strip }}
-DOMNITRACE_BUILD_LTO=${{ matrix.lto }}
-DOMNITRACE_BUILD_STATIC_LIBGCC=${{ matrix.static-libgcc }}
-DOMNITRACE_BUILD_STATIC_LIBSTDCXX=${{ matrix.static-libstdcxx }}
-DOMNITRACE_PYTHON_PREFIX=/opt/conda/envs
-DOMNITRACE_PYTHON_ENVS="py3.6;py3.7;py3.8;py3.9;py3.10;py3.11"
-DOMNITRACE_MAX_THREADS=64
-DOMNITRACE_DISABLE_EXAMPLES="transpose;rccl"
-DOMNITRACE_BUILD_NUMBER=${{ github.run_attempt }}
-DMPI_HEADERS_ALLOW_MPICH=OFF
- name: Test Build-Tree Module
timeout-minutes: 45
shell: bash
run: |
cd build
source /usr/share/modules/init/$(basename ${SHELL})
module use ./share/modulefiles
module avail
module load omnitrace
echo $(which omnitrace)
ldd $(which omnitrace)
omnitrace-instrument --help
omnitrace-avail --help
omnitrace-sample --help
- name: Test Build-Tree Source Script
timeout-minutes: 45
shell: bash
run: |
cd build
source ./share/omnitrace/setup-env.sh
echo $(which omnitrace)
ldd $(which omnitrace)
omnitrace-instrument --help
omnitrace-avail --help
omnitrace-sample --help
- name: Install
timeout-minutes: 10
run:
cmake --build build --target install --parallel 2
- name: Test Install
timeout-minutes: 15
shell: bash
run: |
source /usr/share/modules/init/$(basename ${SHELL})
module use /opt/omnitrace/share/modulefiles
module avail
module load omnitrace
./scripts/test-install.sh --test-omnitrace-{instrument,avail,sample,rewrite,runtime,critical-trace}=1 --test-omnitrace-python=${{ matrix.python }}
- name: Test User API
timeout-minutes: 10
run: |
set -v
./scripts/test-find-package.sh --install-dir /opt/omnitrace
- name: CTest Artifacts
if: failure()
continue-on-error: True
uses: actions/upload-artifact@v3
with:
name: ctest-${{ github.job }}-${{ strategy.job-index }}-log
path: |
build/*.log
- name: Data Artifacts
if: failure()
continue-on-error: True
uses: actions/upload-artifact@v3
with:
name: data-${{ github.job }}-${{ strategy.job-index }}-files
path: |
build/omnitrace-tests-config/*.cfg
build/omnitrace-tests-output/**/*.txt
build/omnitrace-tests-output/**/*-instr*.json
- name: Kill Perfetto
if: success() || failure()
continue-on-error: True
run: |
set +e
RUNNING_PROCS=$(pgrep trace_processor_shell)
if [ -n "${RUNNING_PROCS}" ]; then kill -s 9 ${RUNNING_PROCS}; fi
ubuntu-focal-external-rocm:
runs-on: ubuntu-20.04
container:
image: jrmadsen/omnitrace:ci-base-ubuntu-20.04
strategy:
fail-fast: false
matrix:
compiler: ['g++']
rocm-version: ['5.2', '5.3', '5.4', '5.5']
mpi-headers: ['OFF']
build-jobs: ['3']
ctest-exclude: ['-LE "mpi-example|transpose"']
perfetto-tools: ['OFF']
include:
- compiler: 'g++'
rocm-version: '4.5'
mpi-headers: 'OFF'
build-jobs: '2'
ctest-exclude: '-LE "mpi-example|transpose"'
perfetto-tools: 'ON'
- compiler: 'g++'
rocm-version: 'debian'
mpi-headers: 'ON'
build-jobs: '2'
ctest-exclude: '-LE transpose'
perfetto-tools: 'OFF'
env:
BUILD_TYPE: MinSizeRel
OMPI_ALLOW_RUN_AS_ROOT: 1
OMPI_ALLOW_RUN_AS_ROOT_CONFIRM: 1
steps:
- uses: actions/checkout@v3
- name: Install Packages
timeout-minutes: 25
uses: nick-fields/retry@v2
with:
retry_wait_seconds: 30
timeout_minutes: 25
max_attempts: 5
command: |
apt-get update &&
apt-get install -y software-properties-common wget gnupg2 &&
wget -q -O - https://repo.radeon.com/rocm/rocm.gpg.key | apt-key add - &&
echo "deb [arch=amd64] https://repo.radeon.com/rocm/apt/${{ matrix.rocm-version }}/ ubuntu main" | tee /etc/apt/sources.list.d/rocm.list &&
apt-get update &&
apt-get install -y build-essential m4 autoconf libtool python3-pip clang libomp-dev ${{ matrix.compiler }} libudev1 libnuma1 rocm-dev rocm-utils rocm-smi-lib roctracer-dev rocprofiler-dev rccl-dev hip-base hsa-amd-aqlprofile hsa-rocr-dev hsakmt-roct-dev libpapi-dev curl libopenmpi-dev openmpi-bin libfabric-dev &&
python3 -m pip install --upgrade pip &&
python3 -m pip install 'cmake==3.21.4' &&
for i in 6 7 8 9 10; do /opt/conda/envs/py3.${i}/bin/python -m pip install numpy perfetto dataclasses; done
- name: Configure Env
run: |
echo "CC=$(echo '${{ matrix.compiler }}' | sed 's/+/c/g')" >> $GITHUB_ENV
echo "CXX=${{ matrix.compiler }}" >> $GITHUB_ENV
echo "CMAKE_PREFIX_PATH=/opt/dyninst:${CMAKE_PREFIX_PATH}" >> $GITHUB_ENV
echo "LD_LIBRARY_PATH=/opt/rocm/lib:/usr/local/lib:${LD_LIBRARY_PATH}" >> $GITHUB_ENV
cat << EOF > test-install.cfg
OMNITRACE_USE_TIMEMORY = ON
OMNITRACE_USE_PERFETTO = ON
OMNITRACE_USE_PID = OFF
OMNITRACE_USE_SAMPLING = OFF
OMNITRACE_USE_PROCESS_SAMPLING = OFF
OMNITRACE_COUT_OUTPUT = ON
OMNITRACE_TIME_OUTPUT = OFF
OMNITRACE_TIMEMORY_COMPONENTS = cpu_clock cpu_util current_peak_rss kernel_mode_time monotonic_clock monotonic_raw_clock network_stats num_io_in num_io_out num_major_page_faults num_minor_page_faults page_rss peak_rss priority_context_switch process_cpu_clock process_cpu_util read_bytes read_char system_clock thread_cpu_clock thread_cpu_util timestamp trip_count user_clock user_mode_time virtual_memory voluntary_context_switch wall_clock written_bytes written_char
OMNITRACE_OUTPUT_PATH = omnitrace-tests-output
OMNITRACE_OUTPUT_PREFIX = %tag%/
OMNITRACE_DEBUG = OFF
OMNITRACE_VERBOSE = 3
OMNITRACE_DL_VERBOSE = 3
OMNITRACE_PERFETTO_BACKEND = system
EOF
realpath test-install.cfg
cat test-install.cfg
- name: Configure, Build, and Test
timeout-minutes: 115
shell: bash
run:
git config --global --add safe.directory ${PWD} &&
cmake --version &&
TAG="-rocm-${{ matrix.rocm-version }}" &&
TAG="$(echo ${TAG} | sed 's/debian/latest/g')" &&
python3 ./scripts/run-ci.py -B build
--name ${{ github.repository_owner }}-${{ github.ref_name }}-ubuntu-focal-rocm-${{ matrix.compiler }}${TAG}
--build-jobs 2
--site GitHub
--
-DCMAKE_C_COMPILER=$(echo '${{ matrix.compiler }}' | sed 's/+/c/g')
-DCMAKE_CXX_COMPILER=${{ matrix.compiler }}
-DCMAKE_BUILD_TYPE=${{ env.BUILD_TYPE }}
-DCMAKE_INSTALL_PREFIX=/opt/omnitrace
-DOMNITRACE_BUILD_TESTING=ON
-DOMNITRACE_BUILD_DEVELOPER=ON
-DOMNITRACE_BUILD_EXTRA_OPTIMIZATIONS=OFF
-DOMNITRACE_BUILD_LTO=OFF
-DOMNITRACE_USE_MPI=OFF
-DOMNITRACE_USE_HIP=ON
-DOMNITRACE_MAX_THREADS=64
-DOMNITRACE_USE_PAPI=OFF
-DOMNITRACE_USE_OMPT=OFF
-DOMNITRACE_USE_PYTHON=ON
-DOMNITRACE_USE_MPI_HEADERS=${{ matrix.mpi-headers }}
-DOMNITRACE_USE_SANITIZER=OFF
-DOMNITRACE_INSTALL_PERFETTO_TOOLS=${{ matrix.perfetto-tools }}
-DOMNITRACE_PYTHON_PREFIX=/opt/conda/envs
-DOMNITRACE_PYTHON_ENVS="py3.6;py3.7;py3.8;py3.9;py3.10;py3.11"
-DOMNITRACE_CI_MPI_RUN_AS_ROOT=${{ matrix.mpi-headers }}
-DOMNITRACE_CI_GPU=OFF
-DCMAKE_INSTALL_RPATH_USE_LINK_PATH=OFF
-DOMNITRACE_BUILD_NUMBER=${{ github.run_attempt }}
--
${{ matrix.ctest-exclude }}
- name: Install
run:
cmake --build build --target install --parallel 2
- name: Test Install
timeout-minutes: 15
shell: bash
run: |
source /opt/omnitrace/share/omnitrace/setup-env.sh
./scripts/test-install.sh --test-omnitrace-{instrument,avail,sample,python,rewrite,runtime,critical-trace}=1
- name: Test User API
timeout-minutes: 10
run: |
set -v
./scripts/test-find-package.sh --install-dir /opt/omnitrace
- name: CTest Artifacts
if: failure()
continue-on-error: True
uses: actions/upload-artifact@v3
with:
name: ctest-${{ github.job }}-${{ strategy.job-index }}-log
path: |
build/*.log
- name: Data Artifacts
if: failure()
continue-on-error: True
uses: actions/upload-artifact@v3
with:
name: data-${{ github.job }}-${{ strategy.job-index }}-files
path: |
omnitrace-tests-output/**/*.txt
build/omnitrace-tests-config/*.cfg
build/omnitrace-tests-output/**/*.txt
build/omnitrace-tests-output/**/*-instr*.json
- name: Kill Perfetto
if: success() || failure()
continue-on-error: True
run: |
set +e
RUNNING_PROCS=$(pgrep trace_processor_shell)
if [ -n "${RUNNING_PROCS}" ]; then kill -s 9 ${RUNNING_PROCS}; fi
ubuntu-focal:
runs-on: ubuntu-20.04
strategy:
fail-fast: false
matrix:
compiler: ['g++']
mpi: [ 'nompi', 'mpich', 'openmpi' ]
boost: ['OFF']
tbb: ['OFF']
build-type: ['Release']
python: ['ON']
ompt: ['ON']
papi: ['ON']
deps: ['libtbb-dev libboost-{atomic,system,thread,date-time,filesystem,timer}-dev']
include:
- compiler: 'g++'
mpi: 'nompi'
boost: 'ON'
tbb: 'ON'
build-type: 'Release'
python: 'ON'
ompt: 'OFF'
papi: 'OFF'
deps: ''
env:
ELFUTILS_DOWNLOAD_VERSION: 0.186
steps:
- uses: actions/checkout@v3
- name: Install Packages
timeout-minutes: 25
uses: nick-fields/retry@v2
with:
retry_wait_seconds: 30
timeout_minutes: 25
max_attempts: 5
command: |
sudo apt-get update &&
sudo apt-get install -y build-essential m4 autoconf libtool python3-pip clang libomp-dev environment-modules ${{ matrix.deps }} ${{ matrix.compiler }} &&
if [ "${{ matrix.mpi }}" = "mpich" ]; then sudo apt-get install -y libmpich-dev mpich; fi &&
if [ "${{ matrix.mpi }}" = "openmpi" ]; then sudo apt-get install -y libopenmpi-dev openmpi-bin libfabric-dev; fi &&
python3 -m pip install --upgrade pip &&
python3 -m pip install numpy &&
python3 -m pip install perfetto &&
python3 -m pip install 'cmake==3.16.3'
- name: Test Environment Modules
timeout-minutes: 15
run: |
set -v
source /usr/share/modules/init/$(basename ${SHELL})
module avail
- name: Configure Env
run:
echo "CC=$(echo '${{ matrix.compiler }}' | sed 's/+/c/g')" >> $GITHUB_ENV &&
echo "CXX=${{ matrix.compiler }}" >> $GITHUB_ENV &&
echo "${HOME}/.local/bin" >> $GITHUB_PATH
- name: Configure, Build, and Test
timeout-minutes: 115
shell: bash
run:
cmake --version &&
if [ "${{ matrix.mpi }}" = "nompi" ]; then USE_MPI=OFF; else USE_MPI=ON; fi &&
if [ -z "${{ matrix.deps }}" ]; then TAG=""; else TAG="-external-deps"; fi &&
python3 ./scripts/run-ci.py -B ${{ github.workspace }}/build
--name ${{ github.repository_owner }}-${{ github.ref_name }}-ubuntu-focal-${{ matrix.compiler }}-${{ matrix.mpi }}${TAG}
--build-jobs 2
--site GitHub
--
-DCMAKE_C_COMPILER=$(echo '${{ matrix.compiler }}' | sed 's/+/c/g')
-DCMAKE_CXX_COMPILER=${{ matrix.compiler }}
-DCMAKE_BUILD_TYPE=${{ matrix.build-type }}
-DCMAKE_INSTALL_PREFIX=/opt/omnitrace
-DOMNITRACE_BUILD_TESTING=ON
-DOMNITRACE_BUILD_DYNINST=ON
-DOMNITRACE_USE_MPI=${USE_MPI}
-DOMNITRACE_USE_HIP=OFF
-DOMNITRACE_USE_PYTHON=${{ matrix.python }}
-DOMNITRACE_USE_OMPT=${{ matrix.ompt }}
-DOMNITRACE_USE_PAPI=${{ matrix.papi }}
-DDYNINST_BUILD_ELFUTILS=ON
-DDYNINST_BUILD_LIBIBERTY=ON
-DDYNINST_BUILD_TBB=${{ matrix.tbb }}
-DDYNINST_BUILD_BOOST=${{ matrix.boost }}
-DDYNINST_BUILD_SHARED_LIBS=ON
-DDYNINST_BUILD_STATIC_LIBS=OFF
-DDYNINST_ELFUTILS_DOWNLOAD_VERSION=${{ env.ELFUTILS_DOWNLOAD_VERSION }}
-DOMNITRACE_MAX_THREADS=64
-DOMNITRACE_DISABLE_EXAMPLES="transpose;rccl"
-DOMNITRACE_BUILD_NUMBER=${{ github.run_attempt }}
-DMPI_HEADERS_ALLOW_MPICH=ON
- name: Test Build-Tree Env
timeout-minutes: 60
run:
source /usr/share/modules/init/$(basename ${SHELL})
module use ${{ github.workspace }}/build/share/modulefiles
module avail
module load omnitrace
module list
env
module unload omnitrace
module list
env
source ${{ github.workspace }}/build/share/omnitrace/setup-env.sh
env
- name: Install
working-directory: ${{ github.workspace }}/build
run: |
cpack -G STGZ
mkdir -p /opt/omnitrace
./omnitrace-*.sh --prefix=/opt/omnitrace --exclude-subdir --skip-license
- name: Test Install with setup-env.sh
timeout-minutes: 15
run: |
set -v
source /opt/omnitrace/share/omnitrace/setup-env.sh
${{ github.workspace }}/scripts/test-install.sh --test-omnitrace-{instrument,avail,sample,python,rewrite,runtime,critical-trace}=1
- name: Test Install with Modulefile
timeout-minutes: 15
run: |
set -v
source /usr/share/modules/init/$(basename ${SHELL})
module use /opt/omnitrace/share/modulefiles
module load omnitrace
${{ github.workspace }}/scripts/test-install.sh --test-omnitrace-{instrument,avail,sample,python,rewrite,runtime,critical-trace}=1
- name: Test User API
timeout-minutes: 10
run: |
set -v
${{ github.workspace }}/scripts/test-find-package.sh --install-dir /opt/omnitrace
- name: CTest Artifacts
if: failure()
continue-on-error: True
uses: actions/upload-artifact@v3
with:
name: ctest-${{ github.job }}-${{ strategy.job-index }}-log
path: |
${{ github.workspace }}/build/*.log
- name: Data Artifacts
if: failure()
continue-on-error: True
uses: actions/upload-artifact@v3
with:
name: data-${{ github.job }}-${{ strategy.job-index }}-files
path: |
${{ github.workspace }}/build/omnitrace-tests-config/*.cfg
${{ github.workspace }}/build/omnitrace-tests-output/**/*.txt
${{ github.workspace }}/build/omnitrace-tests-output/**/*-instr*.json
- name: Kill Perfetto
if: success() || failure()
continue-on-error: True
run: |
set +e
RUNNING_PROCS=$(pgrep trace_processor_shell)
if [ -n "${RUNNING_PROCS}" ]; then kill -s 9 ${RUNNING_PROCS}; fi
ubuntu-focal-codecov:
runs-on: ubuntu-20.04
container:
image: jrmadsen/omnitrace:ci-base-ubuntu-20.04
options: --cap-add CAP_SYS_ADMIN
env:
OMNITRACE_VERBOSE: 2
OMNITRACE_CAUSAL_BACKEND: perf
steps:
- uses: actions/checkout@v3
- name: Install Packages
timeout-minutes: 25
uses: nick-fields/retry@v2
with:
retry_wait_seconds: 30
timeout_minutes: 25
max_attempts: 5
command: |
apt-get update &&
apt-get install -y build-essential m4 autoconf libtool python3-pip clang libomp-dev environment-modules gcc g++ mpich libmpich-dev texinfo &&
python3 -m pip install --upgrade pip &&
python3 -m pip install numpy &&
python3 -m pip install perfetto &&
python3 -m pip install 'cmake==3.24.1' &&
for i in 6 7 8 9 10; do /opt/conda/envs/py3.${i}/bin/python -m pip install numpy perfetto dataclasses; done
- name: Configure Env
run:
echo "${HOME}/.local/bin" >> $GITHUB_PATH
- name: Configure, Build, and Test
timeout-minutes: 115
shell: bash
run:
git config --global --add safe.directory ${PWD} &&
cmake --version &&
python3 ./scripts/run-ci.py -B build
--name ${{ github.repository_owner }}-${{ github.ref_name }}-ubuntu-focal-codecov-mpi-python-ompt-papi
--build-jobs 2
--site GitHub
--coverage
--
-DCMAKE_INSTALL_PREFIX=/opt/omnitrace
-DOMNITRACE_BUILD_CI=OFF
-DOMNITRACE_BUILD_TESTING=ON
-DOMNITRACE_BUILD_DYNINST=OFF
-DOMNITRACE_BUILD_DEBUG=ON
-DOMNITRACE_BUILD_HIDDEN_VISIBILITY=OFF
-DOMNITRACE_USE_MPI=ON
-DOMNITRACE_USE_PYTHON=ON
-DOMNITRACE_USE_OMPT=ON
-DOMNITRACE_USE_PAPI=ON
-DOMNITRACE_USE_HIP=OFF
-DOMNITRACE_USE_RCCL=OFF
-DOMNITRACE_MAX_THREADS=64
-DOMNITRACE_DISABLE_EXAMPLES="transpose;rccl"
-DOMNITRACE_BUILD_NUMBER=${{ github.run_attempt }}