Merge pull request #453 from RECETOX/hechth-patch-7

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RECETOX · Dec 1, 2023 · 0ea5c86 · 0ea5c86
2 parents ad718c9 + 1e765f8
commit 0ea5c86
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Showing 4 changed files with 8 additions and 8 deletions.
diff --git a/tools/matchms/matchms_formatter.xml b/tools/matchms/matchms_formatter.xml
@@ -1,4 +1,4 @@
-<tool id="matchms_formatter" name="matchms scores formatter" version="@TOOL_VERSION@+galaxy1" profile="21.09">
+<tool id="matchms_formatter" name="matchms scores formatter" version="@TOOL_VERSION@+galaxy2" profile="21.09">
     <description>reformat scores object of matchms to long format table</description>
 
     <macros>
@@ -24,7 +24,7 @@
     <environment_variables>
         <environment_variable name="MPLCONFIGDIR">\$_GALAXY_JOB_TMP_DIR</environment_variable>
         <environment_variable name="XDG_CACHE_HOME">\$_GALAXY_JOB_TMP_DIR</environment_variable>
-        <environment_variable name="OPENBLAS_NUM_THREADS">1</environment_variable>
+        <environment_variable name="OPENBLAS_NUM_THREADS">4</environment_variable>
     </environment_variables>
 
     <configfiles>

diff --git a/tools/matchms/matchms_metadata_merge.xml b/tools/matchms/matchms_metadata_merge.xml
@@ -1,4 +1,4 @@
-<tool id="matchms_metadata_merge" name="matchms metadata merge" version="@TOOL_VERSION@+galaxy2" profile="21.09">
+<tool id="matchms_metadata_merge" name="matchms metadata merge" version="@TOOL_VERSION@+galaxy3" profile="21.09">
     <description>Merge metadata csv into MSP by a specified column</description>
 
     <macros>
@@ -22,7 +22,7 @@
     ]]></command>
 
     <environment_variables>
-        <environment_variable name="OPENBLAS_NUM_THREADS">1</environment_variable>
+        <environment_variable name="OPENBLAS_NUM_THREADS">4</environment_variable>
     </environment_variables>
 
 <configfiles>

diff --git a/tools/matchms/matchms_subsetting.xml b/tools/matchms/matchms_subsetting.xml
@@ -1,4 +1,4 @@
-<tool id="matchms_subsetting" name="matchms subsetting" version="@TOOL_VERSION@+galaxy2" profile="21.09">
+<tool id="matchms_subsetting" name="matchms subsetting" version="@TOOL_VERSION@+galaxy3" profile="21.09">
     <description>Extract spectra from a library given unique metadata identifier</description>
 
     <macros>
@@ -22,7 +22,7 @@
     ]]></command>
 
     <environment_variables>
-        <environment_variable name="OPENBLAS_NUM_THREADS">1</environment_variable>
+        <environment_variable name="OPENBLAS_NUM_THREADS">4</environment_variable>
     </environment_variables>
 
 <configfiles>

diff --git a/tools/rem_complex/rem_complex.xml b/tools/rem_complex/rem_complex.xml
@@ -1,4 +1,4 @@
-<tool id="rem_complex" name="Remove coordination complexes" version="@TOOL_VERSION@+galaxy1"  profile="21.09">
+<tool id="rem_complex" name="Remove coordination complexes" version="@TOOL_VERSION@+galaxy2"  profile="21.09">
     <description>Remove molecular coordination complexes from a list of structure representations</description>
     <macros>
         <import>macros.xml</import>
@@ -16,7 +16,7 @@
     ]]></command>
 
     <environment_variables>
-        <environment_variable name="OPENBLAS_NUM_THREADS">1</environment_variable>
+        <environment_variable name="OPENBLAS_NUM_THREADS">4</environment_variable>
     </environment_variables>
 
     <inputs>