Skip to content

Commit

Permalink
Add 'About' page
Browse files Browse the repository at this point in the history
  • Loading branch information
ttsudipto committed Jul 3, 2023
1 parent 7a89f4b commit 656da32
Show file tree
Hide file tree
Showing 13 changed files with 100 additions and 0 deletions.
88 changes: 88 additions & 0 deletions about.php
Original file line number Diff line number Diff line change
@@ -0,0 +1,88 @@
<?php
include('db.php');

$bioprojectQuery = "select ".implode(",", $viewBioProjectAttributes)." from bioproject order by Grp, Biome desc, AssayType, IsolationSource, BioProject;";
// echo $bioprojectQuery." ".$disease;

$conn = connect();

$bioprojectStmt = $conn->prepare($bioprojectQuery);
// $bioprojectStmt->execute();
// $bioprojectResult = $bioprojectStmt->get_result();
// echo $bioprojectResult->num_rows." ".$bioprojectResult->field_count."<br/><br/>";
// $rows = $bioprojectResult->fetch_all(MYSQLI_ASSOC);
$rows = execute_and_fetch_assoc($bioprojectStmt);
$bioprojectStmt->close();
closeConnection($conn);
?>

<!DOCTYPE html>
<html>
<head>
<meta charset="UTF-8">
<title>About - MDPD</title>
<link rel = "stylesheet" type = "text/css" href = "css/main.css" />
<style>
.intro{
width:80%;
height:auto;
margin:0 10% 0 10%;
}
</style>
</head>
<body>
<div class = "section_header">
<center><p class="title">MDPD - Microbiome Database of Pulmonary Diseases</p></center>
</div>

<div class = "section_menu">
<center>
<table cellpadding="3px">
<tr class="nav">
<td class="nav"><a href="index.php" class="side_nav">Home</a></td>
<td class="nav"><a href="browse.php" class="side_nav">Browse</a></td>
<td class="nav"><a href="statistics.php" class="side_nav">Statistics</a></td>
<td class="nav"><a href="#" class="active">About</a></td>
<td class="nav"><a href="help.html" class="side_nav">Help</a></td>
<td class="nav"><a href="team.html" class="side_nav">Team</a></td>
</tr>
</table>
</center>
</div>

<!--<div class = "section_left"></div>-->

<div class = "section_middle">
<br/>
<p class="intro">
Microbiome Database of Pulmonary Diseases (MDPD) contains a
total of 5970 runs compiled from 64 BioProjects. A brief
summary of these BioProjects along with their external links
to the NCBI BioProject is given as follows:
</p><br/>

<?php
echo "<table class=\"details\" border=\"1\">";
echo "<tr><th>BioProject ID</th><th>Run Count</th><th>Group</th><th>Isolation Source</th><th>Biome</th><th>Assay Type</th><th>NCBI BioProject Links</th></tr>";
foreach($rows as $row){
echo "<tr>";
echo "<td><a style=\"color:#003325;\" target=\"_blank\" href=\"bioproject_id.php?key=".$row["BioProject"]."\">".$row["BioProject"]." <img src=\"resource/redirect-icon.png\" height=\"14pt\" width=\"auto\" /></a></td>";
echo "<td>".$row["RunCount"]."</td>";
echo "<td>".str_replace(";", "; ", $row["Grp"])."</td>";
echo "<td>".str_replace(";", "; ", $row["IsolationSource"])."</td>";
echo "<td>".str_replace(";", "; ", $row["Biome"])."</td>";
echo "<td>".str_replace(";", "; ", $row["AssayType"])."</td>";
echo "<td><a style=\"color:#003325;\" target=\"_blank\" href=\"https://www.ncbi.nlm.nih.gov/bioproject/?term=".$row["BioProject"]."\">https://www.ncbi.nlm.nih.gov/bioproject/?term=".$row["BioProject"]." <img src=\"resource/redirect-icon.png\" height=\"14pt\" width=\"auto\" /></a></td>";
echo "</tr>";
}
echo "</table>";
?>
<br/><hr/>
<p style="font-size:0.9em;text-align:center;">
&#169; 2023 Bose Institute. All rights reserved. For queries, please contact Dr. Sudipto Saha
(<a style="color:#003325;" href="mailto:[email protected]">[email protected]</a>,
<a style="color:#003325;" href="mailto:[email protected]">[email protected]</a>).
</p>
</div>
</body>
</html>
1 change: 1 addition & 0 deletions advance_search_result.php
Original file line number Diff line number Diff line change
Expand Up @@ -211,6 +211,7 @@ function refValues($arr){
<td class="nav"><a href="index.php" class="side_nav">Home</a></td>
<td class="nav"><a href="browse.php" class="side_nav">Browse</a></td>
<td class="nav"><a href="statistics.php" class="side_nav">Statistics</a></td>
<td class="nav"><a href="about.php" class="side_nav">About</a></td>
<td class="nav"><a href="help.html" class="side_nav">Help</a></td>
<td class="nav"><a href="team.html" class="side_nav">Team</a></td>
</tr>
Expand Down
1 change: 1 addition & 0 deletions bioproject_id.php
Original file line number Diff line number Diff line change
Expand Up @@ -74,6 +74,7 @@
<td class="nav"><a href="index.php" class="side_nav">Home</a></td>
<td class="nav"><a href="browse.php" class="side_nav">Browse</a></td>
<td class="nav"><a href="statistics.php" class="side_nav">Statistics</a></td>
<td class="nav"><a href="about.php" class="side_nav">About</a></td>
<td class="nav"><a href="help.html" class="side_nav">Help</a></td>
<td class="nav"><a href="team.html" class="side_nav">Team</a></td>
</tr>
Expand Down
1 change: 1 addition & 0 deletions browse.php
Original file line number Diff line number Diff line change
Expand Up @@ -19,6 +19,7 @@
<td class="nav"><a href="index.php" class="side_nav">Home</a></td>
<td class="nav"><a href="#" class="active">Browse</a></td>
<td class="nav"><a href="statistics.php" class="side_nav">Statistics</a></td>
<td class="nav"><a href="about.php" class="side_nav">About</a></td>
<td class="nav"><a href="help.html" class="side_nav">Help</a></td>
<td class="nav"><a href="team.html" class="side_nav">Team</a></td>
</tr>
Expand Down
1 change: 1 addition & 0 deletions heatmap.php
Original file line number Diff line number Diff line change
Expand Up @@ -31,6 +31,7 @@
<td class="nav"><a href="index.php" class="side_nav">Home</a></td>
<td class="nav"><a href="browse.php" class="side_nav">Browse</a></td>
<td class="nav"><a href="statistics.php" class="side_nav">Statistics</a></td>
<td class="nav"><a href="about.php" class="side_nav">About</a></td>
<td class="nav"><a href="help.html" class="side_nav">Help</a></td>
<td class="nav"><a href="team.html" class="side_nav">Team</a></td>
</tr>
Expand Down
1 change: 1 addition & 0 deletions help.html
Original file line number Diff line number Diff line change
Expand Up @@ -28,6 +28,7 @@
<td class="nav"><a href="index.php" class="side_nav">Home</a></td>
<td class="nav"><a href="browse.php" class="side_nav">Browse</a></td>
<td class="nav"><a href="statistics.php" class="side_nav">Statistics</a></td>
<td class="nav"><a href="about.php" class="side_nav">About</a></td>
<td class="nav"><a href="#" class="active">Help</a></td>
<td class="nav"><a href="team.html" class="side_nav">Team</a></td>
</tr>
Expand Down
1 change: 1 addition & 0 deletions index.php
Original file line number Diff line number Diff line change
Expand Up @@ -28,6 +28,7 @@
<td class="nav"><a href="#" class="active">Home</a></td>
<td class="nav"><a href="browse.php" class="side_nav">Browse</a></td>
<td class="nav"><a href="statistics.php" class="side_nav">Statistics</a></td>
<td class="nav"><a href="about.php" class="side_nav">About</a></td>
<td class="nav"><a href="help.html" class="side_nav">Help</a></td>
<td class="nav"><a href="team.html" class="side_nav">Team</a></td>
</tr>
Expand Down
1 change: 1 addition & 0 deletions krona.php
Original file line number Diff line number Diff line change
Expand Up @@ -47,6 +47,7 @@
<td class="nav"><a href="index.php" class="side_nav">Home</a></td>
<td class="nav"><a href="browse.php" class="side_nav">Browse</a></td>
<td class="nav"><a href="statistics.php" class="side_nav">Statistics</a></td>
<td class="nav"><a href="about.php" class="side_nav">About</a></td>
<td class="nav"><a href="help.html" class="side_nav">Help</a></td>
<td class="nav"><a href="team.html" class="side_nav">Team</a></td>
</tr>
Expand Down
1 change: 1 addition & 0 deletions lda.php
Original file line number Diff line number Diff line change
Expand Up @@ -31,6 +31,7 @@
<td class="nav"><a href="index.php" class="side_nav">Home</a></td>
<td class="nav"><a href="browse.php" class="side_nav">Browse</a></td>
<td class="nav"><a href="statistics.php" class="side_nav">Statistics</a></td>
<td class="nav"><a href="about.php" class="side_nav">About</a></td>
<td class="nav"><a href="help.html" class="side_nav">Help</a></td>
<td class="nav"><a href="team.html" class="side_nav">Team</a></td>
</tr>
Expand Down
1 change: 1 addition & 0 deletions run_id.php
Original file line number Diff line number Diff line change
Expand Up @@ -38,6 +38,7 @@
<td class="nav"><a href="index.php" class="side_nav">Home</a></td>
<td class="nav"><a href="browse.php" class="side_nav">Browse</a></td>
<td class="nav"><a href="statistics.php" class="side_nav">Statistics</a></td>
<td class="nav"><a href="about.php" class="side_nav">About</a></td>
<td class="nav"><a href="help.html" class="side_nav">Help</a></td>
<td class="nav"><a href="team.html" class="side_nav">Team</a></td>
</tr>
Expand Down
1 change: 1 addition & 0 deletions similarity.php
Original file line number Diff line number Diff line change
Expand Up @@ -42,6 +42,7 @@
<td class="nav"><a href="index.php" class="side_nav">Home</a></td>
<td class="nav"><a href="browse.php" class="side_nav">Browse</a></td>
<td class="nav"><a href="statistics.php" class="side_nav">Statistics</a></td>
<td class="nav"><a href="about.php" class="side_nav">About</a></td>
<td class="nav"><a href="help.html" class="side_nav">Help</a></td>
<td class="nav"><a href="team.html" class="side_nav">Team</a></td>
</tr>
Expand Down
1 change: 1 addition & 0 deletions statistics.php
Original file line number Diff line number Diff line change
Expand Up @@ -55,6 +55,7 @@
<td class="nav"><a href="index.php" class="side_nav">Home</a></td>
<td class="nav"><a href="browse.php" class="side_nav">Browse</a></td>
<td class="nav"><a href="#" class="active">Statistics</a></td>
<td class="nav"><a href="about.php" class="side_nav">About</a></td>
<td class="nav"><a href="help.html" class="side_nav">Help</a></td>
<td class="nav"><a href="team.html" class="side_nav">Team</a></td>
</tr>
Expand Down
1 change: 1 addition & 0 deletions team.html
Original file line number Diff line number Diff line change
Expand Up @@ -42,6 +42,7 @@
<td class="nav"><a href="index.php" class="side_nav">Home</a></td>
<td class="nav"><a href="browse.php" class="side_nav">Browse</a></td>
<td class="nav"><a href="statistics.php" class="side_nav">Statistics</a></td>
<td class="nav"><a href="about.php" class="side_nav">About</a></td>
<td class="nav"><a href="help.html" class="side_nav">Help</a></td>
<td class="nav"><a href="#" class="active">Team</a></td>
</tr>
Expand Down

0 comments on commit 656da32

Please sign in to comment.