fix anon-chi issues in create_episode_file

Public-Health-Scotland · May 29, 2024 · 3433f0d · 3433f0d
1 parent d5697c6
commit 3433f0d
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Showing 2 changed files with 5 additions and 5 deletions.
diff --git a/R/create_episode_file.R b/R/create_episode_file.R
@@ -30,7 +30,7 @@ create_episode_file <- function(
       col_select = c("gpprac", "cluster", "hbpraccode")
     ),
     slf_deaths_lookup = read_file(get_slf_deaths_lookup_path(year)) %>% slfhelper::get_chi(),
-    sc_client = read_file(get_sc_client_lookup_path(year)),
+    sc_client = read_file(get_sc_client_lookup_path(year)) %>% slfhelper::get_anon_chi(),
     write_to_disk = TRUE,
     anon_chi_out = TRUE) {
   processed_data_list <- purrr::discard(processed_data_list, ~ is.null(.x) | identical(.x, tibble::tibble()))

diff --git a/R/join_sparra_hhg.R b/R/join_sparra_hhg.R
@@ -11,7 +11,7 @@ join_sparra_hhg <- function(data, year) {
       read_file(get_sparra_path(year)) %>%
         dplyr::rename(sparra_start_fy = "sparra_risk_score") %>%
         slfhelper::get_chi(),
-      by = c("chi" = "upi_number"),
+      by = c("chi"),
       na_matches = "never",
       relationship = "many-to-one"
     )
@@ -25,7 +25,7 @@ join_sparra_hhg <- function(data, year) {
       read_file(get_sparra_path(next_fy(year))) %>%
         dplyr::rename(sparra_end_fy = "sparra_risk_score") %>%
         slfhelper::get_chi(),
-      by = c("chi" = "upi_number"),
+      by = c("chi"),
       na_matches = "never",
       relationship = "many-to-one"
     )
@@ -39,7 +39,7 @@ join_sparra_hhg <- function(data, year) {
       read_file(get_hhg_path(year)) %>%
         dplyr::rename(hhg_start_fy = "hhg_score") %>%
         slfhelper::get_chi(),
-      by = c("chi" = "upi_number"),
+      by = c("chi"),
       na_matches = "never",
       relationship = "many-to-one"
     )
@@ -53,7 +53,7 @@ join_sparra_hhg <- function(data, year) {
       read_file(get_hhg_path(next_fy(year))) %>%
         dplyr::rename(hhg_end_fy = "hhg_score") %>%
         slfhelper::get_chi(),
-      by = c("chi" = "upi_number"),
+      by = c("chi"),
       na_matches = "never",
       relationship = "many-to-one"
     )