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From 3D Segmentation to Omniverse: Mesh Conversion, USD Export, and Visualization Workflow #1891

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merged 25 commits into from
Dec 12, 2024

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KumoLiu
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@KumoLiu KumoLiu commented Dec 5, 2024

Fixes # .

Description

This tutorial focuses on converting raw segmentation data into USD format and visualizing it in NVIDIA Omniverse for high-quality 3D rendering and manipulation.

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  • Avoid including large-size files in the PR.
  • Clean up long text outputs from code cells in the notebook.
  • For security purposes, please check the contents and remove any sensitive info such as user names and private key.
  • Ensure (1) hyperlinks and markdown anchors are working (2) use relative paths for tutorial repo files (3) put figure and graphs in the ./figure folder
  • Notebook runs automatically ./runner.sh -t <path to .ipynb file>

Signed-off-by: YunLiu <[email protected]>
Signed-off-by: YunLiu <[email protected]>
Signed-off-by: YunLiu <[email protected]>
Signed-off-by: YunLiu <[email protected]>
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@KumoLiu
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KumoLiu commented Dec 11, 2024

Skip https://github.com/Project-MONAI/tutorials/blob/main/3d_registration/learn2reg_oasis_unpaired_brain_mr.ipynb this tutorial for now since it took over 90 minutes to run in daily ci. (The dataset is too large to download)

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Looks good!

@KumoLiu KumoLiu merged commit e0bba33 into Project-MONAI:main Dec 12, 2024
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3 participants