[pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

setup.cfg

@@ -7,79 +7,79 @@ license_file = LICENSE.md
 url = https://nei.plasmapy.org
 description = Package for non-equilibrium ionization modeling of plasma
 long_description = file: README.rst
-classifiers=
-  Development Status :: 3 - Alpha
-  Intended Audience :: Science/Research
-  License :: OSI Approved :: BSD License
-  Operating System :: OS Independent
-  Programming Language :: Python :: 3
-  Programming Language :: Python :: 3.8
-  Programming Language :: Python :: 3.9
-  Programming Language :: Python :: 3.10
-  Programming Language :: Python :: Implementation :: CPython
-  Topic :: Scientific/Engineering :: Physics
-  Topic :: Scientific/Engineering :: Astronomy
+classifiers =
+    Development Status :: 3 - Alpha
+    Intended Audience :: Science/Research
+    License :: OSI Approved :: BSD License
+    Operating System :: OS Independent
+    Programming Language :: Python :: 3
+    Programming Language :: Python :: 3.8
+    Programming Language :: Python :: 3.9
+    Programming Language :: Python :: 3.10
+    Programming Language :: Python :: Implementation :: CPython
+    Topic :: Scientific/Engineering :: Physics
+    Topic :: Scientific/Engineering :: Astronomy
 
 [options]
 zip_safe = False
 packages = find:
 python_requires = >=3.8
 setup_requires =
-  setuptools_scm
+    setuptools_scm
 install_requires =
-  astropy >= 4.3.1
-  h5py >= 3.0
-  matplotlib >= 3.4
-  numpy >= 1.20
-  plasmapy >= 0.7
-  scipy >= 1.5
-  setuptools >= 50.0
+    astropy >= 4.3.1
+    h5py >= 3.0
+    matplotlib >= 3.4
+    numpy >= 1.20
+    plasmapy >= 0.7
+    scipy >= 1.5
+    setuptools >= 50.0
 
 [options.extras_require]
 extras =
-  # ought to mirror requirements/extras.txt
-  # for developers
-  pre-commit
-  setuptools_scm
-  tox
+    # ought to mirror requirements/extras.txt
+    # for developers
+    pre-commit
+    setuptools_scm
+    tox
 tests =
-  # ought to mirror requirements/tests.txt
-  %(extras)s
-  dlint
-  flake8
-  flake8-absolute-import
-  flake8-rst-docstrings
-  flake8-use-fstring
-  hypothesis
-  pydocstyle
-  pygments
-  pytest >= 6.0.0
-  pytest-regressions
-  pytest-xdist
+    # ought to mirror requirements/tests.txt
+    %(extras)s
+    dlint
+    flake8
+    flake8-absolute-import
+    flake8-rst-docstrings
+    flake8-use-fstring
+    hypothesis
+    pydocstyle
+    pygments
+    pytest >= 6.0.0
+    pytest-regressions
+    pytest-xdist
 docs =
-  # ought to mirror requirements/docs/txt
-  %(extras)s
-  docutils
-  ipykernel
-  nbsphinx
-  numpydoc
-  pillow
-  pygments >= 2.11.0
-  sphinx >= 3.2.0
-  sphinx-automodapi
-  sphinx-changelog
-  sphinxcontrib-bibtex
-  sphinx-copybutton
-  sphinx-gallery
-  sphinx-hoverxref >= 1.0.0
-  sphinx_rtd_theme >= 1.0.0
-  towncrier >= 19.2.0
+    # ought to mirror requirements/docs/txt
+    %(extras)s
+    docutils
+    ipykernel
+    nbsphinx
+    numpydoc
+    pillow
+    pygments >= 2.11.0
+    sphinx >= 3.2.0
+    sphinx-automodapi
+    sphinx-changelog
+    sphinxcontrib-bibtex
+    sphinx-copybutton
+    sphinx-gallery
+    sphinx-hoverxref >= 1.0.0
+    sphinx_rtd_theme >= 1.0.0
+    towncrier >= 19.2.0
 developer =
-  # install everything for developers
-  # ought to functionally mirror requirements.txt
-  %(docs)s
-  %(extras)s
-  %(tests)s
+    # install everything for developers
+    # ought to functionally mirror requirements.txt
+    %(docs)s
+    %(extras)s
+    %(tests)s
 
 [options.package_data]
 plasmapy_nei = data/*
@@ -94,106 +94,106 @@ minversion = 6.0
 testpaths = "plasmapy_nei"
 norecursedirs = "build" "docs/"
 doctest_optionflags =
-  NORMALIZE_WHITESPACE
-  ELLIPSIS
-  NUMBER
+    NORMALIZE_WHITESPACE
+    ELLIPSIS
+    NUMBER
 addopts = --doctest-modules --doctest-continue-on-failure
 filterwarnings =
-  ignore:.*Creating a LegacyVersion.*:DeprecationWarning
+    ignore:.*Creating a LegacyVersion.*:DeprecationWarning
 
 [flake8]
 convention = numpy
 extend-ignore =
-  D105,
-  D107,
-  # Ignoring D202 allows blank lines to be put on either side of code "paragraphs" at the beginning of a function.
-  D202,
-  # D205 and D400 are ignored to allow the "one-liner" to exceed one
-  # line, which is sometimes necessary for even concise descriptions of plasma
-  # physics functions and classes.
-  D205,
-  # D302 is unnecessary as we are using Python 3.6+.
-  D302,
-  # D205 and D400 are ignored to allow the "one-liner" to exceed one
-  # line, which is sometimes necessary for even concise descriptions of plasma
-  # physics functions and classes.
-  D400,
-  # D403: First word of the first line should be properly capitalized ('Latex', not 'LaTeX') # Dominik: good job, pydocstyle /s
-  D403,
-  # E203 something something whitespace? TODO check again
-  E203,
-  E501,
-  # E731 do not assign a lambda, use a def - Dominik: disagreed, lambdas have uses
-  E731,
-  F401,
-  F405,
-  # W605 invalid escape sequence,
-  W605,
-  RST210,
-  RST213,
-  # RST305 so that ReST substitutions in a different file can be used
-  RST305,
-  RST306
+    D105,
+    D107,
+    # Ignoring D202 allows blank lines to be put on either side of code "paragraphs" at the beginning of a function.
+    D202,
+    # D205 and D400 are ignored to allow the "one-liner" to exceed one
+    # line, which is sometimes necessary for even concise descriptions of plasma
+    # physics functions and classes.
+    D205,
+    # D302 is unnecessary as we are using Python 3.6+.
+    D302,
+    # D205 and D400 are ignored to allow the "one-liner" to exceed one
+    # line, which is sometimes necessary for even concise descriptions of plasma
+    # physics functions and classes.
+    D400,
+    # D403: First word of the first line should be properly capitalized ('Latex', not 'LaTeX') # Dominik: good job, pydocstyle /s
+    D403,
+    # E203 something something whitespace? TODO check again
+    E203,
+    E501,
+    # E731 do not assign a lambda, use a def - Dominik: disagreed, lambdas have uses
+    E731,
+    F401,
+    F405,
+    # W605 invalid escape sequence,
+    W605,
+    RST210,
+    RST213,
+    # RST305 so that ReST substitutions in a different file can be used
+    RST305,
+    RST306
 exclude =
-  extern,
-  sphinx,
-  *test*,
-  *parsetab.py,
-  conftest.py,
-  docs/conf.py,
-  setup.py,
-  .jupyter
+    extern,
+    sphinx,
+    *test*,
+    *parsetab.py,
+    conftest.py,
+    docs/conf.py,
+    setup.py,
+    .jupyter
 # Use rst-roles and rst-directives to list roles and directives from
 # Sphinx extensions so that they don't get flagged when using
 # flake8-rst-docstrings.
 rst-roles =
-  attr
-  cite
-  cite:ct
-  cite:cts
-  cite:p
-  cite:ps
-  cite:t
-  cite:ts
-  class
-  confval
-  data
-  event
-  exc
-  file
-  func
-  meth
-  mod
-  ref
-  rst:dir
-  term
+    attr
+    cite
+    cite:ct
+    cite:cts
+    cite:p
+    cite:ps
+    cite:t
+    cite:ts
+    class
+    confval
+    data
+    event
+    exc
+    file
+    func
+    meth
+    mod
+    ref
+    rst:dir
+    term
 rst-directives =
-  confval
-  deprecated
-  event
-  nbgallery
-  rst:directive
-  todo
+    confval
+    deprecated
+    event
+    nbgallery
+    rst:directive
+    todo
 enable-extensions =
-  # Look for strings that have {} in them but aren't f-strings.
-  # If there is a false positive from this in a file, put that in
-  # per-file-ignores.
-  FS003
+    # Look for strings that have {} in them but aren't f-strings.
+    # If there is a false positive from this in a file, put that in
+    # per-file-ignores.
+    FS003
 
 [coverage:run]
 omit =
-  ci-helpers/*
-  */tests/*
-  plasmapy_nei/version.py
+    ci-helpers/*
+    */tests/*
+    plasmapy_nei/version.py
 
 [coverage:report]
 exclude_lines =
-  coverage: ignore
-  ImportError
-  ModuleNotFoundError
-  @vectorize
-  @numba.vectorize
-  @numba.jit
-  @jit
-  @numba.njit
-  @njit
+    coverage: ignore
+    ImportError
+    ModuleNotFoundError
+    @vectorize
+    @numba.vectorize
+    @numba.jit
+    @jit
+    @numba.njit
+    @njit