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[DOCS] Update reconstruction.rst to use dashes in flags instead of underscores #801

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[DOCS] Update reconstruction.rst to use dashes in flags instead of underscores #801

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12 changes: 6 additions & 6 deletions docs/reconstruction.rst
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Original file line number Diff line number Diff line change
Expand Up @@ -65,8 +65,8 @@ To use a pre-packaged workflow, simply provide the name from the leftmost column

$ qsiprep-docker \
/path/to/bids /path/for/reconstruction/outputs participant \
--recon_input /output/from/qsiprep \
--recon_spec dsi_studio_gqi \
--recon-input /output/from/qsiprep \
--recon-spec dsi_studio_gqi \
--fs-license-file /path/to/license.txt


Expand Down Expand Up @@ -164,8 +164,8 @@ You can run::

$ qsiprep-docker \
derivatives/qsiprep derivatives participant \
--recon_input derivatives/qsiprep \
--recon_spec mrtrix_multishell_msmt_ACT-hsvs \
--recon-input derivatives/qsiprep \
--recon-spec mrtrix_multishell_msmt_ACT-hsvs \
--freesurfer-input derivatives/freesurfer \
--fs-license-file /path/to/license.txt

Expand Down Expand Up @@ -520,8 +520,8 @@ Assuming this file is called ``qgi_scalar_export.json`` and you've installed

$ qsiprep-docker \
/path/to/bids /where/my/reconstructed/data/goes participant \
--recon_input /output/from/qsiprep \
--recon_spec gqi_scalar_export.json \
--recon-input /output/from/qsiprep \
--recon-spec gqi_scalar_export.json \
--fs-license-file /path/to/license.txt


Expand Down