slightly more speed?

PennLINC · Aug 30, 2024 · eb2a075 · eb2a075
1 parent 90d653f
commit eb2a075
Showing 1 changed file with 8 additions and 0 deletions.
diff --git a/qsiprep/tests/test_cli.py b/qsiprep/tests/test_cli.py
@@ -97,6 +97,7 @@ def test_dscsdsi_fmap(data_dir, output_dir, working_dir):
         f"-w={work_dir}",
         "--boilerplate",
         "--sloppy",
+        "--b0-motion-corr-to=first",
         "--write-graph",
         "--mem_mb=4096",
         "--output-resolution=5",
@@ -185,6 +186,7 @@ def test_drbuddi_rpe(data_dir, output_dir, working_dir):
         "--sloppy",
         "--anat-modality=none",
         "--denoise-method=none",
+        "--b0-motion-corr-to=first",
         "--b1_biascorrect_stage=none",
         "--pepolar-method=DRBUDDI",
         f"--eddy_config={eddy_config}",
@@ -220,6 +222,7 @@ def test_drbuddi_shoreline_epi(data_dir, output_dir, working_dir):
         "--sloppy",
         "--anat-modality=none",
         "--denoise-method=none",
+        "--b0-motion-corr-to=first",
         "--b1-biascorrect-stage=none",
         "--pepolar-method=DRBUDDI",
         "--hmc-model=none",
@@ -256,6 +259,7 @@ def test_drbuddi_tensorline_epi(data_dir, output_dir, working_dir):
         "--sloppy",
         "--anat-modality=none",
         "--denoise-method=none",
+        "--b0-motion-corr-to=first",
         "--b1-biascorrect-stage=none",
         "--pepolar-method=DRBUDDI",
         "--hmc-model=tensor",
@@ -497,6 +501,8 @@ def test_maternal_brain_project(data_dir, output_dir, working_dir):
         "participant",
         f"-w={work_dir}",
         "--sloppy",
+        "--denoise-method=none",
+        "--b1-biascorrect-stage=none",
         "--write-graph",
         "--output-resolution=5",
         "--hmc-model=3dSHORE",
@@ -532,6 +538,8 @@ def test_forrest_gump(data_dir, output_dir, working_dir):
         "participant",
         f"-w={work_dir}",
         "--sloppy",
+        "--denoise-method=none",
+        "--b1-biascorrect-stage=none",
         "--write-graph",
         "--output-resolution=5",
         f"--bids-filter-file={bids_filter}",