Merge pull request #135 from PennLINC/docs/minor_fix

[DOCS] minor fix in docs
PennLINC · Aug 8, 2023 · 6d6e5d9 · 6d6e5d9
2 parents c06c91f + ace9568
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diff --git a/docs/source/_static/babs_cli.png b/docs/source/_static/babs_cli.png
diff --git a/docs/source/jobs.rst b/docs/source/jobs.rst
@@ -180,16 +180,15 @@ As you can see, in the summary ``Job status``, there are multiple sections:
 
 #. Line #9-16: Overall summary of number of jobs to complete,
    as well as their breakdowns: number of jobs submitted/finished/pending/running/failed;
-#. Line 18-22: Summary of failed jobs, based on the provided section **alert_log_messages** in
+#. Line #18-22: Summary of failed jobs, based on the provided section **alert_log_messages** in
    ``--container-config-yaml-file``, BABS tried to find user-defined alert messages in failed jobs' log files;
-#. Line 24-25: If there are jobs that failed but don't have defined alert message,
+#. Line #24-25: If there are jobs that failed but don't have defined alert message,
    and ``--job-account`` is requested, BABS will then run job account
    and try to extract more information and summarize.
    For each of these jobs, BABS runs job account command and extracts messages from it.
 
-    * In the above case, as ``hard_runtime_limit: "48:00:00"`` was set,
-      those 56 failed jobs without alert messages failed probably due to exceeding this runtime limit
-      (``h_rt limit`` in the line #25).
+    * In the above case, line #25 tells us that these jobs were killed by the cluster
+      because they exceeded resource limits.
     * For SGE clusters: BABS uses command ``qacct`` for job account,
       and pulls out the code and message from ``failed`` section in ``qacct``.
     * For Slurm clusters: BABS uses command ``sacct`` for job account,

diff --git a/docs/source/walkthrough.rst b/docs/source/walkthrough.rst
@@ -646,9 +646,9 @@ We'll iteratively use ``babs-submit`` and ``babs-status`` to submit jobs and che
 
 We first use ``babs-status`` to check the number of jobs we initially expect to finish successfully.
 In this example walkthrough, as no initial list was provided,
-BABS determines this number based on the number of subject/session pairs in the input BIDS dataset.
+BABS determines this number based on the number of sessions in the input BIDS dataset.
 We did not request extra filtering (based on required files) in our YAML file either,
-so BABS will submit one job per subject/session pair.
+so BABS will submit one job for each session.
 
 ..  code-block:: console