v0.4.0

JustRelax v0.4.0

Diff since v0.3.2

Merged pull requests:

• CompatHelper: add new compat entry for SpecialFunctions at version 2 for package test, (keep existing compat) (#218) (@github-actions[bot])
• Bump crate-ci/typos from 1.23.6 to 1.24.3 (#228) (@dependabot[bot])
• Update some old JP syntax (#229) (@albert-de-montserrat)
• Add phase ratio computation on vertices (#230) (@albert-de-montserrat)
• CompatHelper: bump compat for JLD2 to 0.5, (keep existing compat) (#231) (@github-actions[bot])
• Update ci.yml (#232) (@aelligp)
• Add missing Pressure function (#233) (@aelligp)
• Fix old stress kernels for linear rheologies (#234) (@albert-de-montserrat)
• Fix phase_ratios_vertex in 2D (#235) (@ChristianSchuler)
• Change approach to compute the stress (#236) (@albert-de-montserrat)
• Add JustPIC compatibility (#237) (@aelligp)
• patch AMD (#238) (@aelligp)
• update to JP#main (#239) (@aelligp)
• Bump crate-ci/typos from 1.24.3 to 1.25.0 (#242) (@dependabot[bot])
• Bump codecov/codecov-action from 4.5.0 to 4.6.0 (#243) (@dependabot[bot])
• WENO5 constructor (#244) (@aelligp)
• CompatHelper: add new compat entry for GeophysicalModelGenerator at version 0.7, (keep existing compat) (#246) (@github-actions[bot])
• Update some miniapps (#248) (@albert-de-montserrat)
• Clean up accidentally added files (#249) (@aelligp)
• Adapts WENO5 struct for GPU (#251) (@aelligp)
• Update Project.toml (#256) (@albert-de-montserrat)
• Delete fig2D/2024-10-03_Krafla_Sill_Geometry/checkpoint directory (#257) (@albert-de-montserrat)
• Bump (#258) (@albert-de-montserrat)

Closed issues:

• Problems testing (#252)

v0.3.2

JustRelax v0.3.2

Diff since v0.3.1

Merged pull requests:

• Compute melt fraction (#223) (@aelligp)
• Few improvements to PressureKernels.jl (#224) (@albert-de-montserrat)
• Thermal Stresses with MeltDependent_Density (#225) (@aelligp)
• Fix non-MPI geometry bug (#226) (@albert-de-montserrat)
• Minor bump (#227) (@albert-de-montserrat)

v0.3.1

JustRelax v0.3.1

Diff since v0.3.0

Merged pull requests:

• fix missing export (#195) (@aelligp)
• CompatHelper: bump compat for JustPIC to 0.4 for package test, (keep existing compat) (#196) (@github-actions[bot])
• Update ShearBand2D_MPI.jl (#198) (@albert-de-montserrat)
• Add new JustRelax logo (#202) (@aelligp)
• bump ParallelStencil.jl to 0.13.2 (#203) (@aelligp)
• Clarify backend doc (#205) (@luraess)
• Clean up docs and shorten README (#206) (@aelligp)
• add correct favicon.ico (#207) (@aelligp)
• Bump crate-ci/typos from 1.21.0 to 1.23.6 (#208) (@dependabot[bot])
• fix NaN(s) error in SH tests (#209) (@aelligp)
• Improve Codecov coverage (#210) (@aelligp)
• Add description of the equation symbols (#211) (@albert-de-montserrat)
• Update equations.md (#214) (@aelligp)
• Fix compute_dt when using IGG (#215) (@albert-de-montserrat)
• Patch buggy compute_dt (#216) (@albert-de-montserrat)
• Make Geometry work without MPI (#217) (@albert-de-montserrat)
• Improve stability of heat diffusion solver (#219) (@albert-de-montserrat)
• Implicit pressure PT update (#220) (@albert-de-montserrat)
• Fix interpolation of Vx*∂ρ∂x to Vy location (#221) (@albert-de-montserrat)
• Bump minor version (#222) (@albert-de-montserrat)

Closed issues:

• Clean-up README (#204)

v0.3.0

JustRelax v0.3.0

Diff since v0.2.1

Merged pull requests:

• Rising 3D blob (#133) (@albert-de-montserrat)
• Checkpointing - adds jld2 function (#145) (@aelligp)
• Throw error for incompatible flow boundary conditions (#163) (@albert-de-montserrat)
• Add velocity2vertex inerpolation to extensions (#166) (@albert-de-montserrat)
• Subduction 2D miniapp (#167) (@albert-de-montserrat)
• Clean up subduction miniapp (#168) (@albert-de-montserrat)
• Fix subduction docs (#169) (@albert-de-montserrat)
• Bump codecov/codecov-action from 4.3.1 to 4.4.1 (#170) (@dependabot[bot])
• Bump julia-actions/cache from 1 to 2 (#171) (@dependabot[bot])
• remove JustPIC from Project.toml (#172) (@aelligp)
• CompatHelper: add new compat entry for JLD2 at version 0.4, (keep existing compat) (#173) (@github-actions[bot])
• Miniapps (#174) (@aelligp)
• Out-of-place copy method for JR types (#175) (@albert-de-montserrat)
• Small changes (#176) (@aelligp)
• Update 3D shear band localisation miniapps (#177) (@albert-de-montserrat)
• Cohesion perturbation (#178) (@albert-de-montserrat)
• Add Displacement struct inside StokesArrays (#181) (@albert-de-montserrat)
• Add vorticity tensor (#182) (@albert-de-montserrat)
• Add adiabatic heating (#183) (@albert-de-montserrat)
• Bump versions (#184) (@aelligp)
• Bump codecov/codecov-action from 4.4.1 to 4.5.0 (#186) (@dependabot[bot])
• Add missing 3D no-slip boundary condition (#187) (@albert-de-montserrat)
• Add DisplacementBoundaryConditions (#188) (@aelligp)
• Improve free surface stabilization kernel (#189) (@albert-de-montserrat)
• add various md's and update docs (#190) (@aelligp)
• Downgrade ParallelStencil (#191) (@albert-de-montserrat)
• Bump JustRelax (#192) (@albert-de-montserrat)

Closed issues:

• Enable metadata for Zenodo (#70)

v0.2.1

JustRelax v0.2.1

Diff since v0.2.0

Merged pull requests:

• Fix docs Project.toml (#142) (@albert-de-montserrat)
• Docs compat (#143) (@albert-de-montserrat)
• Rheology traits (#144) (@albert-de-montserrat)
• Fix docs (#146) (@aelligp)
• Fixes bug in the calculation of phase ratios (#147) (@albert-de-montserrat)
• Delete miniapps/convection/Rifting2D (#148) (@albert-de-montserrat)
• update Project.toml (#149) (@aelligp)
• fixes 3D extension backend mixup (#150) (@aelligp)
• Buildkite implementation (#151) (@aelligp)
• CompatHelper: bump compat for AMDGPU in [weakdeps] to 0.9, (keep existing compat) (#152) (@github-actions[bot])
• CompatHelper: bump compat for CUDA in [weakdeps] to 5, (keep existing compat) (#153) (@github-actions[bot])
• CompatHelper: add new compat entry for JustRelax at version 0.2 for package docs, (keep existing compat) (#154) (@github-actions[bot])
• CompatHelper: add new compat entry for MPI at version 0.20 for package test, (keep existing compat) (#155) (@github-actions[bot])
• CompatHelper: bump compat for AMDGPU in [weakdeps] to 0.9 for package test, (keep existing compat) (#156) (@github-actions[bot])
• CompatHelper: add new compat entry for AllocCheck at version 0.1 for package test, (keep existing compat) (#157) (@github-actions[bot])
• CompatHelper: add new compat entry for Suppressor at version 0.2 for package test, (keep existing compat) (#158) (@github-actions[bot])
• CompatHelper: bump compat for CUDA in [weakdeps] to 5 for package test, (keep existing compat) (#159) (@github-actions[bot])
• CompatHelper: add new compat entry for TOML at version 1 for package test, (keep existing compat) (#160) (@github-actions[bot])
• switch back to CUDA v5.3.5 (#161) (@aelligp)
• Bump version (#162) (@aelligp)

v0.2.0

JustRelax v0.2.0

Diff since v0.1.2

Merged pull requests:

• Rework: Extensions (#130) (@albert-de-montserrat)
• dimensionalize vtk files (#132) (@aelligp)
• Setup docs (#134) (@albert-de-montserrat)
• Fix indexing in free_surface_bcs! (#135) (@albert-de-montserrat)
• Conversions of StokesArrays and ThermalArrays from GPU to CPU (#136) (@albert-de-montserrat)
• Fix conversion of structs from GPU to CPU (#137) (@albert-de-montserrat)
• Bump codecov/codecov-action from 4.1.1 to 4.3.1 (#138) (@dependabot[bot])
• Bump julia-actions/setup-julia from 1 to 2 (#139) (@dependabot[bot])
• Bump crate-ci/typos from 1.20.1 to 1.21.0 (#140) (@dependabot[bot])
• Bump version (#141) (@albert-de-montserrat)

v0.1.2

JustRelax v0.1.2

Diff since v0.1.1

Merged pull requests:

• Free surface (#68) (@albert-de-montserrat)
• Bump Julia (#84) (@albert-de-montserrat)
• Compute local rank grid with lazy_grid (#85) (@albert-de-montserrat)
• Fix shear heating bug (#86) (@albert-de-montserrat)
• Update README.md (#89) (@albert-de-montserrat)
• Comment out broken Windows 1.10 test (#90) (@albert-de-montserrat)
• Strain weakening (#91) (@albert-de-montserrat)
• Non linear softening (#92) (@albert-de-montserrat)
• update Project.toml; (#93) (@aelligp)
• update benchmarks (#95) (@aelligp)
• Bump ImplicitGlobalGrid (#96) (@albert-de-montserrat)
• Compat with ParallelStencil 0.11 (#97) (@albert-de-montserrat)
• Bump GeoParams (#98) (@albert-de-montserrat)
• Bump crate-ci/typos from 1.16.26 to 1.18.0 (#99) (@dependabot[bot])
• Bump actions/cache from 3 to 4 (#100) (@dependabot[bot])
• Fix type signature in Geometry constructor (#101) (@albert-de-montserrat)
• rename cp (#102) (@aelligp)
• Patch to adapt to changes done in GP#main (#104) (@albert-de-montserrat)
• Initialize viscosity with ones to avoid NaNs (#105) (@albert-de-montserrat)
• Fixes shear heating (#106) (@albert-de-montserrat)
• Add CI tests for newer Benchmarks (#107) (@aelligp)
• Problem with temperature advection in the Blankenbach Benchmark (#108) (@LukasFuchs)
• Bump crate-ci/typos from 1.18.0 to 1.19.0 (#109) (@dependabot[bot])
• Subgrid diffusion (#110) (@albert-de-montserrat)
• Delete toy codes from main dir (#112) (@albert-de-montserrat)
• Fix tensor invariant export issues (#113) (@albert-de-montserrat)
• Thermal Stresses (#115) (@aelligp)
• Change one PT coefficient of Stokes equations (#117) (@albert-de-montserrat)
• Delete prototyping files... (#118) (@albert-de-montserrat)
• Create SECURITY.md (#119) (@ranocha)
• Bump CellArrays (#120) (@albert-de-montserrat)
• add workflow file for GLMakie and JustPIC (#121) (@aelligp)
• Free surface stabilization switch (#122) (@albert-de-montserrat)
• Non dimensionalize convection miniapp (#123) (@albert-de-montserrat)
• Update non dimensional convection miniapp (#124) (@albert-de-montserrat)
• Free surface bcs (#125) (@albert-de-montserrat)
• Bump ParallelStencil (#126) (@albert-de-montserrat)
• Bump codecov/codecov-action from 4.0.1 to 4.1.1 (#127) (@dependabot[bot])
• Bump julia-actions/setup-julia from 1 to 2 (#128) (@dependabot[bot])
• Bump crate-ci/typos from 1.19.0 to 1.20.1 (#129) (@dependabot[bot])
• Bump (#131) (@albert-de-montserrat)

Closed issues:

• Register v0.1.0 (#57)
• Wrong grid with simple 2D grid & origin at center (#94)
• Precision error (#103)

v0.1.1

JustRelax v0.1.1

Merged pull requests:

• Add Stokes solver and Stokes 2D mini apps (#3) (@albert-de-montserrat)
• Albert-elasticity (#7) (@albert-de-montserrat)
• Format all .jl files and add check to GitHub workflows (#8) (@psanan)
• Albert-3D-stokes (#9) (@albert-de-montserrat)
• Fix broken CUDA environment (#10) (@albert-de-montserrat)
• Git sid19/explicite residuals (#11) (@GitSid19)
• add MPI reductions (#13) (@albert-de-montserrat)
• harmonic averages (#15) (@albert-de-montserrat)
• 1, 2, and 3D linear diffusion, miniapps and tests (#16) (@albert-de-montserrat)
• Remove @fill clashing with ParallelStencil (#17) (@albert-de-montserrat)
• Strain rate tensor (#18) (@albert-de-montserrat)
• Update damping Stokes scheme (#19) (@albert-de-montserrat)
• Adm-fixtests (#20) (@albert-de-montserrat)
• Ghost nodes in 3D (#21) (@albert-de-montserrat)
• Geoparams 2D (#24) (@albert-de-montserrat)
• Elastic stress and 3D visco-elasto-plastic Stokes (#25) (@albert-de-montserrat)
• 3D BCs (#26) (@albert-de-montserrat)
• Update BCs functions for 3D solvers (#27) (@albert-de-montserrat)
• Fix bug in compute_dt (#28) (@albert-de-montserrat)
• Fix bug in the copy path in meta_data (#29) (@albert-de-montserrat)
• to feature MTK routines (#30) (@aelligp)
• update BCs syntax of miniapps (#31) (@albert-de-montserrat)
• Fix interpolatation of T and P to the qT_i node in the 3D version of compute_flux! (#32) (@albert-de-montserrat)
• interpolate T and P to qT_i (#32) (#33) (@aelligp)
• CI Formater (#34) (@aelligp)
• Ghosts nodes for the temperature field (2D) (#35) (@albert-de-montserrat)
• Fix bugs introduced in compute_flux! (#36) (@albert-de-montserrat)
• Fix bug in stress rotation kernel (#37) (@albert-de-montserrat)
• Fix bug in stress rotation kernel (#37) (#38) (@aelligp)
• Implementation of IGG to 2D stokes solvers (#39) (@aelligp)
• major: added compute_pg to stokes solver, added phases to thermal solver; minor: standardised rheology naming (#40) (@aelligp)
• Plasticity in 2D and 3D solvers (#41) (@albert-de-montserrat)
• Update Project.toml (#43) (@aelligp)
• Rework of PT heat diffusion solver (#44) (@albert-de-montserrat)
• update compute_dt to MPI standards& (#45) (@aelligp)
• Fix indexing bugs in PT heat diffusion solvers (#46) (@albert-de-montserrat)
• Fixes breaking format-related bug from #46 (#47) (@albert-de-montserrat)
• Fix indexing bug in 2D no-slip velocity boundary conditions (#48) (@albert-de-montserrat)
• Particles-in-Cell, multi-phase rheologies & others (#49) (@albert-de-montserrat)
• enable dependabot for GitHub actions (#50) (@ranocha)
• Bump actions/cache from 1 to 3 (#51) (@dependabot[bot])
• Bump actions/checkout from 2 to 4 (#52) (@dependabot[bot])
• Delete Plume2D folder (#53) (@albert-de-montserrat)
• Add source terms to heat diffusion equation (#54) (@albert-de-montserrat)
• Make plasticity great again (#55) (@albert-de-montserrat)
• AMDGPU support (#56) (@albert-de-montserrat)
• TagBot workflow (#58) (@albert-de-montserrat)
• Delete files (#59) (@albert-de-montserrat)
• Fix and update convection miniapp (#60) (@albert-de-montserrat)
• Packages compat (#61) (@albert-de-montserrat)
• Coupling 3D solvers with JustPIC (#62) (@albert-de-montserrat)
• Add sticky air layer to 2D convection miniapp (#64) (@albert-de-montserrat)
• WENO 5 advection scheme (#65) (@albert-de-montserrat)
• improve access pattern (#66) (@albert-de-montserrat)
• Update convection mini-apps (#67) (@albert-de-montserrat)
• Update benchmark test to actively used solvers (#69) (@aelligp)
• Delete .zenodo.json (#72) (@aelligp)
• Delete GlobalConvection2D_WENO5.jl (#73) (@albert-de-montserrat)
• Shearheating (#74) (@aelligp)
• Bump compats (#75) (@albert-de-montserrat)
• Update Zenodo badge (#76) (@aelligp)
• fix typo of README (#77) (@aelligp)
• Conditionaly load CUDA and AMDGPU (#78) (@albert-de-montserrat)
• Fix CellArrays bugs (#79) (@albert-de-montserrat)
• Add more tests for CellArrays (#80) (@albert-de-montserrat)
• Fix no-slip BCs (#81) (@albert-de-montserrat)

Closed issues:

• Specify minimum Julia version supported (#4)
• Add format check to CI (#5)
• Tests: use ReferenceTests.jl (#6)
• Int64 with PS{Float64} (#63)

0.1.1

What's Changed

• Update benchmark test to actively used solvers by @aelligp in #69

Full Changelog: 0.1.0...0.1.1

V0.1.0

What's Changed

• Add Stokes solver and Stokes 2D mini apps by @albert-de-montserrat in #3
• Albert-elasticity by @albert-de-montserrat in #7
• Albert-3D-stokes by @albert-de-montserrat in #9
• Format all .jl files and add check to GitHub workflows by @psanan in #8
• Fix broken CUDA environment by @albert-de-montserrat in #10
• Git sid19/explicite residuals by @GitSid19 in #11
• add MPI reductions by @albert-de-montserrat in #13
• harmonic averages by @albert-de-montserrat in #15
• 1, 2, and 3D linear diffusion, miniapps and tests by @albert-de-montserrat in #16
• Remove @fill clashing with ParallelStencil by @albert-de-montserrat in #17
• Strain rate tensor by @albert-de-montserrat in #18
• Update damping Stokes scheme by @albert-de-montserrat in #19
• Adm-fixtests by @albert-de-montserrat in #20
• Ghost nodes in 3D by @albert-de-montserrat in #21
• Geoparams 2D by @albert-de-montserrat in #24
• Elastic stress and 3D visco-elasto-plastic Stokes by @albert-de-montserrat in #25
• 3D BCs by @albert-de-montserrat in #26
• Update BCs functions for 3D solvers by @albert-de-montserrat in #27
• Fix bug in compute_dt by @albert-de-montserrat in #28
• Fix bug in the copy path in meta_data by @albert-de-montserrat in #29
• to feature MTK routines by @aelligp in #30
• update BCs syntax of miniapps by @albert-de-montserrat in #31
• Fix interpolatation of T and P to the qT_i node in the 3D version of compute_flux! by @albert-de-montserrat in #32
• CI Formater by @aelligp in #34
• Ghosts nodes for the temperature field (2D) by @albert-de-montserrat in #35
• Fix bugs introduced in compute_flux! by @albert-de-montserrat in #36
• Fix bug in stress rotation kernel by @albert-de-montserrat in #37
• Implementation of IGG to 2D stokes solvers by @aelligp in #39
• major: added compute_pg to stokes solver, added phases to thermal solver; minor: standardised rheology naming by @aelligp in #40
• Plasticity in 2D and 3D solvers by @albert-de-montserrat in #41
• Update Project.toml by @aelligp in #43
• Rework of PT heat diffusion solver by @albert-de-montserrat in #44
• update compute_dt to MPI standards& by @aelligp in #45
• Fix indexing bugs in PT heat diffusion solvers by @albert-de-montserrat in #46
• Fixes breaking format-related bug from #46 by @albert-de-montserrat in #47
• Fix indexing bug in 2D no-slip velocity boundary conditions by @albert-de-montserrat in #48
• enable dependabot for GitHub actions by @ranocha in #50
• Bump actions/cache from 1 to 3 by @dependabot in #51
• Bump actions/checkout from 2 to 4 by @dependabot in #52
• Particles-in-Cell, multi-phase rheologies & others by @albert-de-montserrat in #49
• Delete Plume2D folder by @albert-de-montserrat in #53
• Add source terms to heat diffusion equation by @albert-de-montserrat in #54
• AMDGPU support by @albert-de-montserrat in #56
• Make plasticity great again by @albert-de-montserrat in #55
• Delete files by @albert-de-montserrat in #59
• Fix and update convection miniapp by @albert-de-montserrat in #60
• TagBot workflow by @albert-de-montserrat in #58
• Packages compat by @albert-de-montserrat in #61
• Coupling 3D solvers with JustPIC by @albert-de-montserrat in #62
• Add sticky air layer to 2D convection miniapp by @albert-de-montserrat in #64
• WENO 5 advection scheme by @albert-de-montserrat in #65
• improve access pattern by @albert-de-montserrat in #66
• Update convection mini-apps by @albert-de-montserrat in #67

New Contributors

• @albert-de-montserrat made their first contribution in #3
• @psanan made their first contribution in #8
• @GitSid19 made their first contribution in #11
• @ranocha made their first contribution in #50
• @dependabot made their first contribution in #51

Full Changelog: https://github.com/PTsolvers/JustRelax.jl/commits/0.1.0