Merge pull request #5 from MSDLLCpapers/renv_fix

update renv for gsDesign/gsDesign2 and the comparison code for latest…

Comp/r-east_gsd_tte.qmd

@@ -410,7 +410,9 @@ pval_fut <- pfs_rpact$futilityBoundsPValueScale
 zval_eff <- pfs_rpact_gsd$criticalValues
 zval_fut <- pfs_rpact_gsd$futilityBounds
 pcross_h0_eff <- pfs_rpact_gsd$alphaSpent
-pcross_h0_fut <- as.numeric(summary(pfs_rpact)$summaryItems[[20]]$values[[1]])
+pcross_h0_fut <- summary(pfs_rpact)$summaryItems |> 
+  purrr::keep(~.x$title == "Exit probability for futility (under H0)") |>
+  purrr::map_dbl(~as.numeric(.x$values))
 
 ia1_eff <- c(zval_eff[1], pval_eff[1], hr_bound_eff[1], pcross_h0_eff[1], pcross_h1_eff[1])
 fa_eff <-  c(zval_eff[2], pval_eff[2], hr_bound_eff[2], pcross_h0_eff[2], pcross_h1_eff[2])
@@ -461,7 +463,6 @@ pfs_rpact_sum |>
 
 ```
 
-
 ```{r}
 sessionInfo()
 ```

renv.lock

@@ -1895,7 +1895,7 @@
     },
     "gsDesign": {
       "Package": "gsDesign",
-      "Version": "3.6.4",
+      "Version": "3.6.5",
       "Source": "Repository",
       "Repository": "CRAN",
       "Requirements": [
@@ -1918,7 +1918,7 @@
     },
     "gsDesign2": {
       "Package": "gsDesign2",
-      "Version": "1.1.2",
+      "Version": "1.1.3",
       "Source": "Repository",
       "Repository": "CRAN",
       "Requirements": [