improve schema help text

PGScatalog · May 26, 2022 · 4949306 · 4949306
1 parent 57b0289
commit 4949306
Showing 1 changed file with 5 additions and 3 deletions.
diff --git a/nextflow_schema.json b/nextflow_schema.json
@@ -28,7 +28,7 @@
                 },
                 "scorefile": {
                     "type": "string",
-                    "description": "Path to a scoring file in PGS Catalog format",
+                    "description": "Path to a scoring file in PGS Catalog format. Multiple scorefiles can be specified using wildcards (e.g., ``--scorefile path/to/scores/*.txt``)",
                     "fa_icon": "fas fa-file-alt"
                 },
                 "accession": {
@@ -93,11 +93,13 @@
                 },
                 "keep_multiallelic": {
                     "type": "boolean",
-                    "description": "Keep multiallelic alleles?"
+                    "description": "Keep multiallelic alleles?",
+                    "default": false
                 },
                 "keep_ambiguous": {
                     "type": "boolean",
-                    "description": "Keep ambiguous matches"
+                    "description": "Keep ambiguous matches",
+                    "default": false
                 },
                 "min_overlap": {
                     "type": "number",