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# You can create any custom variable you would like, and they will be accessible | ||
# in the templates via {{ site.myvariable }}. | ||
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title: Your awesome title | ||
email: [email protected] | ||
title: DataSci Connect Resources for Data Science Training | ||
# email: [email protected] | ||
description: >- # this means to ignore newlines until "baseurl:" | ||
Write an awesome description for your new site here. You can edit this | ||
line in _config.yml. It will appear in your document head meta (for | ||
Google search results) and in your feed.xml site description. | ||
Library of sharable data science-focused resources including | ||
learning modules, | ||
program management best practices and potential pitfalls, | ||
and others. | ||
baseurl: "" # the subpath of your site, e.g. /blog | ||
url: "" # the base hostname & protocol for your site, e.g. http://example.com | ||
twitter_username: jekyllrb | ||
github_username: jekyll | ||
url: "https://ouhscbbmc.github.io/odss-datasci-connect-resource" # the base hostname & protocol for your site, e.g. http://example.com | ||
# twitter_username: jekyllrb | ||
# github_username: jekyll | ||
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# Build settings | ||
theme: minima | ||
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--- | ||
layout: "page" | ||
layout: "home" | ||
title: "DataSci Connect" | ||
--- | ||
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--- | ||
layout: page | ||
title: "Suggested Resources" | ||
categories: skills datasets | ||
--- | ||
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Training & Learning Skills | ||
======== | ||
------------- | ||
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Basic | ||
------------ | ||
### Basic | ||
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* Julia | ||
* Python | ||
* R | ||
* SQL | ||
* GitHub | ||
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Genomics | ||
------ | ||
### Genomics | ||
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* R Bioconductor | ||
* [Add more tools, and their links] | ||
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AI | ||
------ | ||
### AI | ||
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* qqqq | ||
* [Add tools, and their links] | ||
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EHR | ||
------ | ||
### EHR | ||
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* OHDSI/OMOP | ||
* Epic (likely restricted via institution) | ||
* Cerner (restricted via institution?) | ||
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Training & Learning Platforms | ||
======== | ||
### Training & Learning Platforms | ||
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* [Coursera](https://www.coursera.org) | ||
* [Data Carpentry](https://datacarpentry.org) | ||
* [AI Institute](https://research.cec.sc.edu/aii) at South Carolina | ||
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This is an example on GitHub of a shared R code and Jupyter notebook that student can download and run locally to learn how to preprocess and analyze microarray data, perform differential expression analysis, and generate visualization plots (https://github.com/ARINBRE/microarray) | ||
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Data Sources (Publicly Available) | ||
========= | ||
------------- | ||
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Internal Temporary Notes | ||
------------- | ||
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Attributes to describe | ||
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* one-time cohort vs any-time/on-demand access | ||
* free vs paid | ||
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yrahmatallah - [email protected] | ||
cassandra-hui | ||
julipetal - [email protected] | ||
Anna Bennett GitHub - amb599 - | ||
CRPNAU - [email protected] | ||
amandabbraley - [email protected] | ||
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Juli Petereit | ||
Cassandra Hui | ||
Yasir Rahamataliah - | ||
Anna Bennett | ||
Amanda Braley | ||
Will Beasley |