Update NEWS for release

DESCRIPTION

@@ -1,28 +1,27 @@
-Package: splatter
 Type: Package
+Package: splatter
 Title: Simple Simulation of Single-cell RNA Sequencing Data
-Version: 1.29.0
-Date: 2024-05-01
-Authors@R:
-    c(person("Luke", "Zappia", role = c("aut", "cre"),
-      email = "[email protected]",
-      comment = c(ORCID = "0000-0001-7744-8565", GitHub = "lazappi")),
-      person("Belinda", "Phipson", role = c("aut"),
-      email = "[email protected]",
-      comment = c(ORCID = "0000-0002-1711-7454", GitHub = "bphipson")),
-      person("Christina", "Azodi", role = c("ctb"),
-      email = "[email protected]",
-      comment = c(ORCID = "0000-0002-6097-606X", GitHub = "azodichr")),
-      person("Alicia", "Oshlack", role = c("aut"),
-      email = "[email protected]",
-      comment = c(ORCID = "0000-0001-9788-5690")))
+Version: 1.29.1
+Date: 2024-10-17
+Authors@R:c(
+    person("Luke", "Zappia", , "[email protected]", role = c("aut", "cre"),
+           comment = c(ORCID = "0000-0001-7744-8565", GitHub = "lazappi")),
+    person("Belinda", "Phipson", , "[email protected]", role = "aut",
+           comment = c(ORCID = "0000-0002-1711-7454", GitHub = "bphipson")),
+    person("Christina", "Azodi", , "[email protected]", role = "ctb",
+           comment = c(ORCID = "0000-0002-6097-606X", GitHub = "azodichr")),
+    person("Alicia", "Oshlack", , "[email protected]", role = "aut",
+           comment = c(ORCID = "0000-0001-9788-5690"))
+  )
 Description: Splatter is a package for the simulation of single-cell RNA
-    sequencing count data. It provides a simple interface for creating complex
-    simulations that are reproducible and well-documented. Parameters can be
-    estimated from real data and functions are provided for comparing real and
-    simulated datasets.
+    sequencing count data. It provides a simple interface for creating
+    complex simulations that are reproducible and well-documented.
+    Parameters can be estimated from real data and functions are provided
+    for comparing real and simulated datasets.
 License: GPL-3 + file LICENSE
-LazyData: FALSE
+URL: https://bioconductor.org/packages/splatter/,
+    https://github.com/Oshlack/splatter, http://oshlacklab.com/splatter/
+BugReports: https://github.com/Oshlack/splatter/issues
 Depends:
     R (>= 4.0),
     SingleCellExperiment
@@ -55,16 +54,16 @@ Suggests:
     GenomeInfoDb,
     GenomicRanges,
     ggplot2 (>= 3.4.0),
-    IRanges,
     igraph,
+    IRanges,
     knitr,
     limSolve,
     lme4,
     magick,
     mfa,
     phenopath,
-    progress,
     preprocessCore,
+    progress,
     pscl,
     rmarkdown,
     scales,
@@ -75,12 +74,12 @@ Suggests:
     spelling,
     testthat,
     VariantAnnotation,
-    zinbwave,
-biocViews: SingleCell, RNASeq, Transcriptomics, GeneExpression, Sequencing,
-    Software, ImmunoOncology
-URL: https://bioconductor.org/packages/splatter/, https://github.com/Oshlack/splatter, http://oshlacklab.com/splatter/
-BugReports: https://github.com/Oshlack/splatter/issues
-RoxygenNote: 7.3.2
+    zinbwave
+VignetteBuilder: 
+    knitr
+biocViews: SingleCell, RNASeq, Transcriptomics, GeneExpression,
+    Sequencing, Software, ImmunoOncology
 Encoding: UTF-8
-VignetteBuilder: knitr
 Language: en-GB
+LazyData: FALSE
+RoxygenNote: 7.3.2

NEWS.md

@@ -1,10 +1,13 @@
 # DEVELOPMENT VERSION
 
+## Version 1.29.1 (2024-10-17)
+
 * Update roxygen2 version
 * Remove old CI config files
 * Add PR commands GitHub action
 * Re-configure pkgdown site
 * Add dependabot GitHub action
+* Update README
 
 ## Version 1.29.0 (2024-05-01)
 

inst/NEWS.Rd

@@ -1,6 +1,22 @@
 \name{NEWS}
 \title{News for Package \pkg{splatter}}
 
+\section{Version 1.30.0, Bioconductor 3.20 Release (2024-10-30)}{
+  \itemize{
+    \item{
+      Minor maintenance chores:
+      \itemize{
+        \item{Update roxygen2 version}
+        \item{Remove old CI config files}
+        \item{Add PR commands GitHub action}
+        \item{Re-configure pkgdown site}
+        \item{Add dependabot GitHub action}
+        \item{Update README}
+      }
+    }
+  }
+}
+
 \section{Version 1.28.0, Bioconductor 3.19 Release (2024-05-01)}{
   \itemize{
     \item{