Merge pull request #12 from OpenSourceBrain/test_multi_nrn

Update spike times in tests for NRN 8.1
OpenSourceBrain · Apr 4, 2023 · 859f80d · 859f80d
2 parents 5ef20cf + eaddafa
commit 859f80d
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diff --git a/.github/workflows/omv-ci.yml b/.github/workflows/omv-ci.yml
@@ -3,19 +3,20 @@ name: Continuous build using OMV
 
 on:
   push:
-    branches: [ master, development, experimental ]
+    branches: [ master, development, experimental, test* ]
   pull_request:
-    branches: [ master, development, experimental ]
+    branches: [ master, development, experimental, test* ]
 
 jobs:
   build:
 
-    runs-on: ubuntu-latest
+    runs-on: ${{ matrix.runs-on }}
     strategy:
       fail-fast: false
       matrix:
         python-version: [ 3.9 ]
-        engine: [ NEURON, jNeuroML, jNeuroML_NEURON, jNeuroML_validate, jNeuroML_validatev1, "NEURON:7.6", "NEURON:7.7" ]
+        engine: [ jNeuroML, jNeuroML_NEURON, jNeuroML_validate, jNeuroML_validatev1, "NEURON:8.1" ]
+        runs-on: [ubuntu-latest, macos-latest]
 
 
     steps:

diff --git a/.gitignore b/.gitignore
@@ -45,3 +45,4 @@ simulations
 /NEURON/tests.log
 /tests.log
 /NEURON_2007/*.log
+arm64
diff --git a/NEURON/test/.test.mep b/NEURON/test/.test.mep
@@ -5,4 +5,4 @@ system: Testing Golgi
 experiments:
   pacemaking:
     expected:
-      spike times: [0.041427, 0.199477, 0.362728, 0.525695, 0.688318, 0.850665, 1.012798, 1.174768, 1.33661, 1.498353, 1.660013, 1.821605, 1.983138, 2.144618, 2.30605, 2.467442, 2.628792, 2.790105, 2.951385, 3.112597, 3.273812, 3.434997, 3.596155, 3.757285, 3.91839]
+      spike times: [0.041427, 0.199485, 0.362743, 0.525715, 0.688348, 0.8507, 1.01284, 1.174815, 1.336665, 1.49842, 1.659113, 1.820678, 1.982223, 2.143723, 2.305175, 2.466582, 2.627947, 2.789275, 2.950565, 3.111822, 3.273047, 3.434245, 3.59541, 3.75655, 3.917665]
diff --git a/NEURON/test/.test.neuron.omt b/NEURON/test/.test.neuron.omt
@@ -15,5 +15,5 @@ experiments:
         spike detection: 
           method: threshold
           threshold: 0
-        tolerance: 0
+        tolerance: 0.000631  # non zero tolerance due to differences in times between ubuntu and mac...
 
diff --git a/NEURON/test/.test.soma.mep b/NEURON/test/.test.soma.mep
@@ -5,4 +5,4 @@ system: Testing Golgi
 experiments:
   pacemaking:
     expected:
-      spike times: [0.057706, 0.072057, 0.086836, 0.103116, 0.121569, 0.142782, 0.167439, 0.195775, 0.458494, 0.488709, 0.522085, 0.559345, 0.600174, 0.643928, 0.689896, 0.737449, 0.786095, 0.806101, 0.813874, 0.821581, 0.829287, 0.837015, 0.844757, 0.852513, 0.860291, 0.868099, 0.875931, 0.88378, 0.891642, 0.899523, 0.907423, 0.915341, 0.923276, 0.931227, 0.939195, 0.947179, 0.955187, 0.963198, 0.971223, 0.979261, 0.987313, 0.995386, 1.00904, 1.0601, 1.11279, 1.16507, 1.217, 1.26868, 1.32018, 1.37154, 1.4228, 1.47408]
+      spike times: [0.057707, 0.072137, 0.086924, 0.10321, 0.12167, 0.142889, 0.167422, 0.195745, 0.458496, 0.488716, 0.522098, 0.559362, 0.600192, 0.643945, 0.689911, 0.73746, 0.786102, 0.806101, 0.813874, 0.82158, 0.829284, 0.837, 0.844736, 0.852509, 0.860287, 0.868093, 0.875914, 0.883755, 0.891616, 0.899497, 0.907396, 0.915313, 0.923248, 0.931199, 0.939166, 0.947148, 0.955145, 0.963156, 0.97118, 0.979218, 0.987269, 0.995341, 1.00884, 1.05986, 1.11267, 1.16507, 1.21696, 1.26861, 1.32009, 1.37159, 1.42282, 1.47398]
diff --git a/NEURON/test/.test_fig3A.mep b/NEURON/test/.test_fig3A.mep
@@ -5,6 +5,6 @@ system: Testing Golgi
 experiments:
   rebound:
     expected:
-      spike times:  [0.134225, 0.42035, 0.7035, 6.107725, 6.247675, 6.43055, 6.6215, 6.8208, 7.027025, 7.23885]
+      spike times:  [0.134225, 0.420275, 0.713525, 6.107725, 6.2477, 6.430575, 6.62155, 6.82085, 7.027075, 7.238925]
 
 
diff --git a/NEURON/test/.test_fig4A.mep b/NEURON/test/.test_fig4A.mep
@@ -5,12 +5,11 @@ system: Testing Golgi
 experiments:
   dep1:
     expected:
-      spike times: [0.515175, 0.55125, 0.6069, 0.66235, 0.7174, 0.771775, 0.8256, 0.87895, 0.931975, 0.9847, 1.037225, 1.089575, 1.141775, 1.193875, 1.2459, 1.297875, 1.349775, 1.401675, 1.453525, 1.505375]
-
+      spike times: [0.515175, 0.55125, 0.606925, 0.662375, 0.717425, 0.7718, 0.825625, 0.878975, 0.932, 0.98475, 1.037275, 1.0896, 1.141825, 1.193925, 1.24595, 1.297925, 1.34985, 1.40175, 1.4536, 1.505475]
+                  
   dep2:
     expected:
-      spike times: [0.509, 0.52755, 0.565725, 0.602875, 0.640475, 0.6776, 0.714275, 0.7505, 0.78635, 0.821825, 0.857025, 0.89195, 0.92665, 0.96115, 0.995475, 1.02965, 1.063775, 1.0935, 1.1283, 1.16185, 1.195475, 1.229, 1.2625, 1.295925, 1.3293, 1.36265, 1.395975, 1.429275, 1.46255, 1.495775]
-
+      spike times: [0.509, 0.52755, 0.565725, 0.602875, 0.640475, 0.677625, 0.7143, 0.750525, 0.786375, 0.82185, 0.85705, 0.892, 0.9267, 0.9612, 0.995525, 1.0297, 1.06375, 1.09765, 1.131475, 1.1652, 1.19885, 1.23245, 1.26595, 1.299425, 1.33285, 1.366225, 1.399575, 1.4329, 1.466175, 1.49945]
   dep3:
     expected:
-      spike times: [0.506425, 0.519175, 0.5487, 0.5783, 0.604475, 0.6349, 0.664075, 0.69305, 0.72165, 0.74995, 0.77795, 0.805725, 0.833275, 0.8606, 0.88775, 0.914725, 0.94155, 0.968225, 0.994775, 1.021225, 1.047575, 1.073825, 1.1, 1.126075, 1.1521, 1.17805, 1.20395, 1.2298, 1.2556, 1.281375, 1.3071, 1.332775, 1.358425, 1.38405, 1.40965, 1.435225, 1.460775, 1.4863, 1.511825]
+      spike times:  [0.506425, 0.519175, 0.5487, 0.578225, 0.6081, 0.637725, 0.667025, 0.69595, 0.72455, 0.75285, 0.780875, 0.808625, 0.836175, 0.8635, 0.89065, 0.9176, 0.944425, 0.971125, 0.997675, 1.024125, 1.050475, 1.076725, 1.1029, 1.128975, 1.155, 1.18095, 1.20685, 1.2327, 1.258525, 1.284275, 1.31, 1.335675, 1.361325, 1.386975, 1.41255, 1.43815, 1.4637, 1.489225, 1.515075]
diff --git a/NEURON/test/.test_fig4Bii.mep b/NEURON/test/.test_fig4Bii.mep
@@ -6,76 +6,78 @@ experiments:
 
   frate1:
     expected:
-      spike times: [0.0817, 0.255725, 0.436825, 0.620375, 0.8065, 0.994775]
+      spike times: [0.0817, 0.255725, 0.43685, 0.6204, 0.806525, 0.994825]
 
   frate2:
     expected:
-      spike times: [0.056725, 0.168925, 0.291875, 0.414375, 0.537025, 0.660125, 0.783775, 0.907975]
+      spike times: [0.056725, 0.168925, 0.2919, 0.4144, 0.53705, 0.66015, 0.783825, 0.908025]
 
   frate3:
     expected:
-      spike times: [0.04485, 0.12535, 0.220675, 0.3153, 0.409225, 0.50285, 0.596375, 0.689975, 0.7837, 0.8776, 0.971675]
+      spike times: [0.04485, 0.12535, 0.2207, 0.315325, 0.40925, 0.502875, 0.596425, 0.690025, 0.78375, 0.87765, 0.97175]
 
   frate4:
     expected:
-      spike times: [0.037775, 0.098875, 0.17755, 0.255775, 0.33305, 0.40965, 0.485825, 0.56175, 0.637525, 0.71325, 0.788975, 0.864725, 0.940525, 1.0164]
+      spike times: [0.037775, 0.098875, 0.17755, 0.2558, 0.333075, 0.409675, 0.48585, 0.561775, 0.637575, 0.7133, 0.789025, 0.8648, 0.9406, 1.016475]
 
   frate5:
     expected:
-      spike times: [0.03305, 0.0814, 0.14895, 0.21625, 0.28265, 0.348225, 0.413225, 0.47775, 0.542, 0.606025, 0.6699, 0.733675, 0.797425, 0.861125, 0.924825, 0.988525]
+      spike times: [0.03305, 0.0814, 0.148975, 0.216275, 0.282675, 0.34825, 0.41325, 0.4778, 0.542025, 0.606075, 0.66995, 0.73375, 0.797475, 0.861175, 0.924875, 0.9886]
 
   frate6:
     expected:
-      spike times: [0.02965, 0.069225, 0.1289, 0.18835, 0.247075, 0.304925, 0.362125, 0.418775, 0.47505, 0.531, 0.5867, 0.64225, 0.69765, 0.75295, 0.808175, 0.86335, 0.9185, 0.97365]
+      spike times: [0.02965, 0.069225, 0.128925, 0.18835, 0.247075, 0.30495, 0.36215, 0.418825, 0.475075, 0.53105, 0.58675, 0.6423, 0.6977, 0.753, 0.808225, 0.863425, 0.918575, 0.973725]
 
   frate7:
     expected:
-      spike times: [0.0271, 0.060375, 0.1142, 0.16765, 0.22065, 0.272825, 0.324275, 0.375175, 0.425625, 0.4757, 0.525475, 0.575025, 0.624375, 0.673575, 0.722675, 0.771675, 0.8206, 0.86945, 0.918275, 0.967075, 1.01585]
+      spike times: [0.0271, 0.060375, 0.114225, 0.167675, 0.220675, 0.272825, 0.3243, 0.3752, 0.42565, 0.475725, 0.525525, 0.575075, 0.624425, 0.673625, 0.722725, 0.771725, 0.82065, 0.869525, 0.91835, 0.96715, 1.01595]
 
   frate8:
     expected:
-      spike times: [0.025125, 0.05375, 0.103, 0.15175, 0.200275, 0.24805, 0.2951, 0.3416, 0.387625, 0.433225, 0.478525, 0.523525, 0.568325, 0.612925, 0.657375, 0.7017, 0.745925, 0.79005, 0.834125, 0.87815, 0.922125, 0.96605, 1.009975]
+      spike times: [0.025125, 0.05375, 0.103025, 0.151775, 0.2003, 0.24805, 0.295125, 0.341625, 0.38765, 0.43325, 0.47855, 0.523575, 0.56835, 0.612975, 0.657425, 0.70175, 0.745975, 0.790125, 0.8342, 0.878225, 0.9222, 0.966125, 1.01005]
 
   frate9:
     expected:
-      spike times:  [0.023525, 0.04865, 0.094225, 0.13915, 0.1841, 0.228325, 0.271925, 0.314925, 0.357425, 0.39955, 0.4413, 0.48285, 0.519175, 0.561175, 0.601825, 0.64245, 0.68295, 0.72335, 0.763675, 0.803925, 0.844125, 0.884275, 0.9244, 0.964475, 1.004525]
+      spike times:  [0.023525, 0.04865, 0.094225, 0.139175, 0.184125, 0.22835, 0.271925, 0.31495, 0.357475, 0.399575, 0.441325, 0.4828, 0.524025, 0.56505, 0.605875, 0.64655, 0.687125, 0.727575, 0.767925, 0.808225, 0.84845, 0.888625, 0.928775, 0.968875, 1.00895]
 
   frate10:
     expected:
-      spike times: [0.02225, 0.0446, 0.087125, 0.128925, 0.170925, 0.212275, 0.253, 0.293175, 0.33285, 0.372125, 0.41105, 0.44965, 0.488, 0.5261, 0.564025, 0.6018, 0.6394, 0.6769, 0.7143, 0.7516, 0.788825, 0.825975, 0.863075, 0.900125, 0.93715, 0.974125, 1.0111]
-
+      spike times: [0.02225, 0.0446, 0.08715, 0.12895, 0.17095, 0.2123, 0.253025, 0.2932, 0.332875, 0.37215, 0.411075, 0.449675, 0.488025, 0.52615, 0.564075, 0.60185, 0.63945, 0.67695, 0.71435, 0.75165, 0.788875, 0.82605, 0.86315, 0.9002, 0.937225, 0.9742, 1.011175]
+      
   frate11:
     expected:
-      spike times: [0.021175, 0.04135, 0.0813, 0.120475, 0.16, 0.198925, 0.237275, 0.275075, 0.3124, 0.349325, 0.3859, 0.42215, 0.458125, 0.49385, 0.5294, 0.56475, 0.59995, 0.635025, 0.669975, 0.70485, 0.7396, 0.7743, 0.8089, 0.843475, 0.877975, 0.91245, 0.9469, 0.9813, 1.015675]
+      spike times: [0.021175, 0.04135, 0.0813, 0.1205, 0.16, 0.198925, 0.237275, 0.2751, 0.312425, 0.34935, 0.385925, 0.422175, 0.45815, 0.4939, 0.529425, 0.5648, 0.6, 0.635075, 0.670025, 0.7049, 0.73965, 0.77435, 0.808975, 0.84355, 0.87805, 0.912525, 0.946975, 0.981375, 1.01575]
 
+
   frate12:
     expected:
-      spike times: [0.020275, 0.0387, 0.0764, 0.113375, 0.15075, 0.187625, 0.224025, 0.255525, 0.291775, 0.3266, 0.361175, 0.395425, 0.4294, 0.46315, 0.496675, 0.530025, 0.5632, 0.596225, 0.62915, 0.66195, 0.69465, 0.727275, 0.7598, 0.792275, 0.8247, 0.857075, 0.8894, 0.9217, 0.95395, 0.986175, 1.018375]
-
+      spike times: [0.020275, 0.0387, 0.0764, 0.113375, 0.150775, 0.18765, 0.223975, 0.25985, 0.290925, 0.3268, 0.361225, 0.3955, 0.429475, 0.4632, 0.496725, 0.530075, 0.56325, 0.5963, 0.6292, 0.662, 0.6947, 0.727325, 0.759875, 0.79235, 0.824775, 0.85715, 0.889475, 0.92175, 0.954025, 0.98625, 1.01845]
+      
   frate13:
     expected:
-      spike times:  [0.0195, 0.036475, 0.072225, 0.1073, 0.14285, 0.177925, 0.2125, 0.246575, 0.280225, 0.31345, 0.34635, 0.3789, 0.4112, 0.44325, 0.475075, 0.506725, 0.5382, 0.569525, 0.6007, 0.631775, 0.66275, 0.6936, 0.7244, 0.755125, 0.785775, 0.81635, 0.8469, 0.8774, 0.907875, 0.938275, 0.968675, 0.99905]
-
+      spike times:  [0.0195, 0.036475, 0.072225, 0.1073, 0.14285, 0.17795, 0.212525, 0.2466, 0.28025, 0.313475, 0.346375, 0.37895, 0.4111, 0.44315, 0.474975, 0.506625, 0.5381, 0.569425, 0.600625, 0.6317, 0.66265, 0.693525, 0.724325, 0.75505, 0.7857, 0.8163, 0.84685, 0.87735, 0.9078, 0.938225, 0.968625, 0.999]
+      
   frate14:
     expected:
-      spike times:  [0.01885, 0.0346, 0.0686, 0.10205, 0.135975, 0.1695, 0.20255, 0.235125, 0.267275, 0.299025, 0.33045, 0.36155, 0.392375, 0.42295, 0.4533, 0.483475, 0.513475, 0.5433, 0.573, 0.602575, 0.632025, 0.6614, 0.690675, 0.719875, 0.749, 0.77805, 0.807075, 0.836025, 0.864925, 0.8938, 0.92265, 0.95145, 0.980225, 1.008975]
-
+      spike times:  [0.01885, 0.0346, 0.068625, 0.10205, 0.136, 0.169525, 0.202575, 0.23515, 0.2673, 0.29905, 0.330475, 0.361575, 0.3924, 0.422975, 0.45335, 0.4835, 0.5135, 0.54335, 0.572925, 0.6025, 0.63195, 0.661325, 0.6906, 0.7198, 0.748925, 0.778, 0.807, 0.835975, 0.864875, 0.89375, 0.922675, 0.948075, 0.977675, 1.006275]
+      
   frate15:
     expected:
-      spike times:  [0.018275, 0.033, 0.065425, 0.09745, 0.12995, 0.1621, 0.193775, 0.22505, 0.255875, 0.286325, 0.31645, 0.346275, 0.3758, 0.4051, 0.434175, 0.46305, 0.49175, 0.520275, 0.548675,0.577025, 0.60175, 0.630625, 0.65835, 0.6862, 0.713975, 0.741675, 0.769325, 0.796925, 0.824475, 0.851975, 0.87945, 0.906875, 0.9343, 0.961675, 0.989025, 1.01635]
-
+      spike times:  [0.018275, 0.033, 0.065425, 0.09745, 0.12995, 0.1621, 0.1938, 0.22505, 0.2559, 0.28635, 0.316475, 0.3463, 0.375825, 0.405125, 0.4342, 0.463075, 0.491775, 0.520325, 0.548725, 0.577, 0.60515, 0.6332, 0.66115, 0.689025, 0.716825, 0.74465, 0.76895, 0.797375, 0.8248, 0.852325, 0.879775, 0.9072, 0.934575, 0.96195, 0.9893, 1.016625]
+      
   frate16:
     expected:
-      spike times:  [0.017775, 0.031625, 0.062575, 0.093375, 0.1246, 0.1555, 0.186, 0.216075, 0.245725, 0.275025, 0.304, 0.332675, 0.361075, 0.389225, 0.417175, 0.4449, 0.472475, 0.499875, 0.527125, 0.554225, 0.58125, 0.608125, 0.634925, 0.66165, 0.688275, 0.71485, 0.741325, 0.767775, 0.79415, 0.8205, 0.8468, 0.87305, 0.899275, 0.92545, 0.951625, 0.97775, 1.003875]
-
+      spike times:  [0.017775, 0.031625, 0.0626, 0.093375, 0.1246, 0.1555, 0.186, 0.216075, 0.24575, 0.27505, 0.304025, 0.3327, 0.3611, 0.389275, 0.4172, 0.44495, 0.4725, 0.4999, 0.52715, 0.554275, 0.581275, 0.608175, 0.634975, 0.6617, 0.688325, 0.7149, 0.7414, 0.767825, 0.794225, 0.82055, 0.84685, 0.873125, 0.89935, 0.925525, 0.9517, 0.977825, 1.00395]
+      
   frate17:
     expected:
-      spike times: [0.017325, 0.0304, 0.06, 0.0897, 0.119775, 0.149575, 0.178975, 0.208, 0.236625, 0.2649, 0.292825, 0.320475, 0.347875, 0.375, 0.401925, 0.42865, 0.4552, 0.481575, 0.507825, 0.533925, 0.5599, 0.585775, 0.61155, 0.637225, 0.662825, 0.68835, 0.7138, 0.7392, 0.764525, 0.789825, 0.81505, 0.84025, 0.865425, 0.89055, 0.915625, 0.9407, 0.965725, 0.99075, 1.01575]
-
+      spike times:  [0.017325, 0.0304, 0.06, 0.0897, 0.119775, 0.149575, 0.179, 0.208, 0.23665, 0.2649, 0.29285, 0.3205, 0.347975, 0.37185, 0.3995, 0.426125, 0.452675, 0.47905, 0.505275, 0.53135, 0.557325, 0.5832, 0.60895, 0.634625, 0.660225, 0.685725, 0.711175, 0.736575, 0.7619, 0.7872, 0.812425, 0.837625, 0.862775, 0.8879, 0.913, 0.938075, 0.9631, 0.988125, 1.013125]
+      
   frate18:
     expected:
-      spike times: [0.016925, 0.02935, 0.0576, 0.08635, 0.115375, 0.144175, 0.172625, 0.200675, 0.22835, 0.2557, 0.2827, 0.30945, 0.3359, 0.36215, 0.38815, 0.413975, 0.4396, 0.465075, 0.4904, 0.515575, 0.54065, 0.5656, 0.59045, 0.6152, 0.639875, 0.664475, 0.689, 0.71345, 0.737875, 0.7622, 0.7865, 0.810775, 0.834975, 0.85915, 0.8833, 0.9074, 0.931475, 0.95555, 0.979575, 1.0036]
-
+      spike times: [0.016925, 0.02935, 0.057625, 0.08635, 0.115375, 0.1442, 0.172625, 0.200675, 0.228375, 0.2557, 0.282725, 0.309475, 0.33595, 0.362175, 0.388175, 0.414, 0.439625, 0.4651, 0.490425, 0.515625, 0.5407, 0.56565, 0.5905, 0.61525, 0.639925, 0.664525, 0.68905, 0.713525, 0.737925, 0.762275, 0.786575, 0.810825, 0.83505, 0.859225, 0.88335, 0.907475, 0.93155, 0.955625, 0.97965, 1.003675]
+      
   frate19:
     expected:
-      spike times: [0.016575, 0.0284, 0.05535, 0.08325, 0.111325, 0.139225, 0.166775, 0.19395, 0.220775, 0.247275, 0.27345, 0.29935, 0.325, 0.3504, 0.3756, 0.400575, 0.4254, 0.45005, 0.47455, 0.4989, 0.52315, 0.547275, 0.5713, 0.595225, 0.619075, 0.642825, 0.6665, 0.690125, 0.7137, 0.737125, 0.76055, 0.783975, 0.807325, 0.83065, 0.853925, 0.877175, 0.9004, 0.9236, 0.946775, 0.969925, 0.993025, 1.01615]
+      spike times: [0.016575, 0.0284, 0.05535, 0.083275, 0.11135, 0.139225, 0.166775, 0.193975, 0.2208, 0.2473, 0.273475, 0.299375, 0.325025, 0.350425, 0.375625, 0.4006, 0.425425, 0.450075, 0.474575, 0.49895, 0.5232, 0.547325, 0.57135, 0.595175, 0.619025, 0.642775, 0.666475, 0.6901, 0.71365, 0.73715, 0.7606, 0.784025, 0.807375, 0.8307, 0.854, 0.87725, 0.900475, 0.923675, 0.946825, 0.969975, 0.9931, 1.0162]
+
diff --git a/NEURON/test/.test_fig5A.mep b/NEURON/test/.test_fig5A.mep
@@ -5,11 +5,11 @@ system: Testing Golgi
 experiments:
   phar_pacemaking_control:
     expected:
-      spike times: [0.0872, 0.289275, 0.499225, 0.7139, 0.9327, 1.154625, 1.378925, 1.605025, 1.832675]
+      spike times: [0.0872, 0.289275, 0.49925, 0.713925, 0.932725, 1.154675, 1.378975, 1.605075, 1.83265]
 
   phar_pacemaking_Ih:
     expected:
-      spike times:  [0.1737, 0.546925, 0.944375, 1.367, 1.810675]
+      spike times: [0.1737, 0.54695, 0.9444, 1.367075, 1.81075]
 
 
   phar_pacemaking_INaP:

diff --git a/NEURON/test/.test_fig5Bi.mep b/NEURON/test/.test_fig5Bi.mep
@@ -5,11 +5,11 @@ system: Testing Golgi
 experiments:
   phar_pacemaking_control: 
     expected:
-      spike times:  [0.22245, 0.2839, 0.3618, 0.439575, 0.5166, 0.593125, 0.6693, 0.7453, 0.8212, 0.897075, 0.97295, 1.04885, 1.1248, 1.2009]
+      spike times:  [0.22245, 0.283925, 0.361825, 0.439575, 0.516625, 0.59315, 0.66935, 0.74535, 0.82125, 0.897125, 0.973, 1.0489, 1.124875, 1.200975]
 
   phar_pacemaking_IK_slow_shift:
     expected:
-      spike times: [0.2273, 0.312, 0.413075, 0.513075, 0.6124, 0.71155, 0.8107, 0.909975, 1.009425, 1.109025]
+      spike times: [0.2273, 0.312025, 0.413075, 0.513075, 0.612425, 0.711575, 0.810725, 0.910025, 1.009225, 1.108825]