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Merge pull request #63 from OpenSourceBrain/feature/add_test_to_check… #365

Merge pull request #63 from OpenSourceBrain/feature/add_test_to_check…

Merge pull request #63 from OpenSourceBrain/feature/add_test_to_check… #365

Workflow file for this run

name: Testing non OMV scripts
on:
push:
branches: [ master, development, experimental, test*, feature/* ]
pull_request:
branches: [ master, development, experimental, test*, feature/* ]
jobs:
build:
runs-on: ubuntu-latest
strategy:
fail-fast: false
matrix:
python-version: [ "3.10", "3.11" ]
steps:
- uses: actions/checkout@v4
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v5
with:
python-version: ${{ matrix.python-version }}
- name: Install OMV
run: |
pip install git+https://github.com/OpenSourceBrain/osb-model-validation
- name: Run tests
run: |
omv install jneuroml
- name: Test tellurium
run: |
pip install tellurium
sudo apt-get install libncurses5 --fix-missing
cd tellurium
python simple.py -nogui
cd ../SBML/tests
pip install python-libsedml
python ./test_tellurium.py
- name: Test validity of files
run: |
pip install pyNeuroML pyNeuroML[annotations]
cd SBML/tests
./validateAll.sh
- name: Test omex file creation
run: |
pip install "pymetadata>=0.4.2" docker "requests<2.32.0"
cd SBML/tests
python ./test_biosimulators_docker.py
- name: Test test_suite output regeneration
run: |
cd test_suite
./test_results_regeneration.sh
- name: Final version info
run: |
omv list -V # list installed engines
pip list
env