Helm chart added. #2
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| name: Test and coverage | |
| on: | |
| pull_request: | |
| push: | |
| workflow_dispatch: | |
| concurrency: | |
| group: check-${{ github.ref }} | |
| cancel-in-progress: true | |
| jobs: | |
| test: | |
| name: test with ${{ matrix.py }} on ${{ matrix.os }} | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| py: | |
| - "3.10" | |
| os: | |
| - ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v3 | |
| with: | |
| fetch-depth: 0 | |
| - name: Setup python for test ${{ matrix.py }} | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: ${{ matrix.py }} | |
| - name: Install test requirements | |
| run: | | |
| python -m pip install -r test-requirements.txt | |
| python -m pip install -e ./openg2p-deduplicator | |
| - name: Run test suite | |
| run: | | |
| pytest --cov-branch --cov-report=term-missing --cov=openg2p_deduplicator --cov=tests openg2p-deduplicator | |
| - name: Upload coverage to Codecov | |
| uses: codecov/codecov-action@v4 | |
| with: | |
| token: ${{ secrets.CODECOV_TOKEN }} |