Badges and codecov on merge

.github/workflows/ci.yaml

@@ -76,11 +76,10 @@ jobs:
 
       - name: codecov-pr
         if: ${{ github.repository == 'OpenFreeEnergy/pontibus'
-                && github.event_name == 'pull_request' }}
-        uses: codecov/codecov-action@v4
+                && github.event_name != 'schedule' }}
+        uses: codecov/codecov-action@v5
         with:
           token: ${{ secrets.CODECOV_TOKEN }}
           file: coverage.xml
           fail_ci_if_error: False
           verbose: True
-          flags: fast-tests

README.md

@@ -1,4 +1,8 @@
 # pontibus
+[![Logo](https://img.shields.io/badge/OSMF-OpenFreeEnergy-%23002f4a)](https://openfree.energy/)
+[![CI](https://github.com/OpenFreeEnergy/pontibus/actions/workflows/ci.yaml/badge.svg)](https://github.com/OpenFreeEnergy/pontibus/actions/workflows/ci.yaml)
+[![Documentation](https://readthedocs.org/projects/pontibus/badge/?version=latest)](https://pontibus.readthedocs.io/en/latest/?badge=latest)
+[![codecov](https://codecov.io/gh/OpenFreeEnergy/pontibus/graph/badge.svg?token=Lq4c3g9plQ)](https://codecov.io/gh/OpenFreeEnergy/pontibus)
 Experimental OpenFE Protocols for Force Field Evaluation
 
 !!WARNING!! This code is experimental and subject to change !!WARNING!!