update ans

OmicsML · Jan 1, 2025 · 66af9da · 66af9da
1 parent bcf4492
commit 66af9da
Showing 1 changed file with 26 additions and 26 deletions.
diff --git a/examples/atlas/sweep_results/Heart_ans.csv b/examples/atlas/sweep_results/Heart_ans.csv
@@ -1,4 +1,4 @@
-Dataset_id,cta_actinn,cta_actinn_best_yaml,cta_actinn_best_res,cta_singlecellnet,cta_singlecellnet_best_yaml,cta_singlecellnet_best_res,cta_scdeepsort,cta_scdeepsort_best_yaml,cta_scdeepsort_best_res,cta_celltypist,cta_celltypist_best_yaml,cta_celltypist_best_res
+Dataset_id,cta_actinn,cta_actinn_best_yaml,cta_actinn_best_res,cta_singlecellnet,cta_singlecellnet_best_yaml,cta_singlecellnet_best_res,cta_scdeepsort,cta_scdeepsort_best_yaml,cta_scdeepsort_best_res,cta_celltypist,cta_celltypist_best_yaml,cta_celltypist_best_res,cta_scdeepsort_run_stats
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   target: FilterGenesPlaceHolder
   params: {}
@@ -78,7 +78,7 @@ Dataset_id,cta_actinn,cta_actinn_best_yaml,cta_actinn_best_res,cta_singlecellnet
     config_dict:
       feature_channel: feature.cell
       label_channel: cell_type
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   target: FilterGenesPercentile
   params: {}
@@ -134,7 +134,7 @@ c5d88abe-f23a-45fa-a534-788985e93dad,"step2:https://wandb.ai/xzy11632/dance-dev/
   params:
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   target: FilterGenesPercentile
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@@ -247,7 +247,7 @@ c5d88abe-f23a-45fa-a534-788985e93dad,"step2:https://wandb.ai/xzy11632/dance-dev/
     config_dict:
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       label_channel: cell_type
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   target: FilterGenesPlaceHolder
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@@ -353,7 +353,7 @@ c5d88abe-f23a-45fa-a534-788985e93dad,"step2:https://wandb.ai/xzy11632/dance-dev/
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   target: FilterGenesScanpyOrder
   params:
@@ -447,7 +447,7 @@ c5d88abe-f23a-45fa-a534-788985e93dad,"step2:https://wandb.ai/xzy11632/dance-dev/
   params:
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@@ -540,7 +540,7 @@ c5d88abe-f23a-45fa-a534-788985e93dad,"step2:https://wandb.ai/xzy11632/dance-dev/
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@@ -648,7 +648,7 @@ c5d88abe-f23a-45fa-a534-788985e93dad,"step2:https://wandb.ai/xzy11632/dance-dev/
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   target: FilterGenesPlaceHolder
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@@ -732,7 +732,7 @@ c5d88abe-f23a-45fa-a534-788985e93dad,"step2:https://wandb.ai/xzy11632/dance-dev/
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@@ -806,7 +806,7 @@ c5d88abe-f23a-45fa-a534-788985e93dad,"step2:https://wandb.ai/xzy11632/dance-dev/
   params:
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   target: FilterGenesPlaceHolder
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@@ -891,7 +891,7 @@ c5d88abe-f23a-45fa-a534-788985e93dad,"step2:https://wandb.ai/xzy11632/dance-dev/
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   target: FilterGenesScanpyOrder
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@@ -1009,7 +1009,7 @@ c5d88abe-f23a-45fa-a534-788985e93dad,"step2:https://wandb.ai/xzy11632/dance-dev/
     config_dict:
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   target: FilterGenesPlaceHolder
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@@ -1126,7 +1126,7 @@ a68b64d8-aee3-4947-81b7-36b8fe5a44d2,"step2:https://wandb.ai/xzy11632/dance-dev/
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   target: FilterGenesScanpyOrder
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@@ -1313,7 +1313,7 @@ d4e69e01-3ba2-4d6b-a15d-e7048f78f22e,"step2:https://wandb.ai/xzy11632/dance-dev/
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@@ -1381,7 +1381,7 @@ d567b692-c374-4628-a508-8008f6778f22,"step2:https://wandb.ai/xzy11632/dance-dev/
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   target: FilterGenesPlaceHolder
 - type: normalize
   target: NormalizeTotal
@@ -1406,7 +1406,7 @@ d567b692-c374-4628-a508-8008f6778f22,"step2:https://wandb.ai/xzy11632/dance-dev/
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   target: FilterGenesScanpyOrder
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   target: FilterGenesPlaceHolder
   params: {}
@@ -1921,7 +1921,7 @@ fa27492b-82ff-4ab7-ac61-0e2b184eee67,"step2:https://wandb.ai/xzy11632/dance-dev/
     config_dict:
       feature_channel: feature.cell
       label_channel: cell_type
-",0.6654999852180481
+",0.6654999852180481,all_total_runs:210|all_finished_runs:188|step2_total_runs:150|step2_finished_runs:128|step3_0_total_runs:20|step3_0_finished_runs:20|step3_1_total_runs:20|step3_1_finished_runs:20|step3_2_total_runs:20|step3_2_finished_runs:20|finished_rate:89.52%
 65badd7a-9262-4fd1-9ce2-eb5dc0ca8039,"step2:https://wandb.ai/xzy11632/dance-dev/sweeps/iyzgg8qc|step3:https://wandb.ai/xzy11632/dance-dev/sweeps/2g6gclgm,https://wandb.ai/xzy11632/dance-dev/sweeps/v8ut5hbp,https://wandb.ai/xzy11632/dance-dev/sweeps/j0a5a1y8","- type: filter.gene
   target: FilterGenesScanpyOrder
   params:
@@ -2008,7 +2008,7 @@ fa27492b-82ff-4ab7-ac61-0e2b184eee67,"step2:https://wandb.ai/xzy11632/dance-dev/
   params:
     config_dict:
       label_channel: cell_type
-",0.3549999892711639,"step2:https://wandb.ai/xzy11632/dance-dev/sweeps/n9pv9var|step3:https://wandb.ai/xzy11632/dance-dev/sweeps/uox7hj7b,https://wandb.ai/xzy11632/dance-dev/sweeps/lghef4b7,https://wandb.ai/xzy11632/dance-dev/sweeps/16q0x97m","- type: filter.gene
+",0.35499998927116394,"step2:https://wandb.ai/xzy11632/dance-dev/sweeps/n9pv9var|step3:https://wandb.ai/xzy11632/dance-dev/sweeps/uox7hj7b,https://wandb.ai/xzy11632/dance-dev/sweeps/lghef4b7,https://wandb.ai/xzy11632/dance-dev/sweeps/16q0x97m","- type: filter.gene
   target: FilterGenesPercentile
   params:
     min_val: 6
@@ -2038,7 +2038,7 @@ fa27492b-82ff-4ab7-ac61-0e2b184eee67,"step2:https://wandb.ai/xzy11632/dance-dev/
     config_dict:
       feature_channel: feature.cell
       label_channel: cell_type
-",0.3454999923706054
+",0.3454999923706054,all_total_runs:210|all_finished_runs:172|step2_total_runs:150|step2_finished_runs:118|step3_0_total_runs:20|step3_0_finished_runs:20|step3_1_total_runs:20|step3_1_finished_runs:19|step3_2_total_runs:20|step3_2_finished_runs:15|finished_rate:81.90%
 f7c1c579-2dc0-47e2-ba19-8165c5a0e353,"step2:https://wandb.ai/xzy11632/dance-dev/sweeps/5o741t7i|step3:https://wandb.ai/xzy11632/dance-dev/sweeps/63x9jmta,https://wandb.ai/xzy11632/dance-dev/sweeps/rlwzwx5n,https://wandb.ai/xzy11632/dance-dev/sweeps/jvvacpgh","- type: filter.gene
   target: FilterGenesPlaceHolder
   params: {}
@@ -2133,7 +2133,7 @@ f7c1c579-2dc0-47e2-ba19-8165c5a0e353,"step2:https://wandb.ai/xzy11632/dance-dev/
     config_dict:
       feature_channel: feature.cell
       label_channel: cell_type
-",0.6359999775886536
+",0.6359999775886536,all_total_runs:210|all_finished_runs:170|step2_total_runs:150|step2_finished_runs:119|step3_0_total_runs:20|step3_0_finished_runs:20|step3_1_total_runs:20|step3_1_finished_runs:19|step3_2_total_runs:20|step3_2_finished_runs:12|finished_rate:80.95%
 ed852810-a003-4386-9846-1638362cee39,"step2:https://wandb.ai/xzy11632/dance-dev/sweeps/2r7es2cd|step3:https://wandb.ai/xzy11632/dance-dev/sweeps/5ppq5ml0,https://wandb.ai/xzy11632/dance-dev/sweeps/2or6v893,https://wandb.ai/xzy11632/dance-dev/sweeps/490783q6","- type: filter.gene
   target: FilterGenesScanpyOrder
   params:
@@ -2255,4 +2255,4 @@ ed852810-a003-4386-9846-1638362cee39,"step2:https://wandb.ai/xzy11632/dance-dev/
     config_dict:
       feature_channel: feature.cell
       label_channel: cell_type
-",0.3149999976158142
+",0.3149999976158142,all_total_runs:210|all_finished_runs:162|step2_total_runs:150|step2_finished_runs:119|step3_0_total_runs:20|step3_0_finished_runs:20|step3_1_total_runs:20|step3_1_finished_runs:13|step3_2_total_runs:20|step3_2_finished_runs:10|finished_rate:77.14%