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--- | ||
layout: ontology_detail | ||
id: upheno | ||
title: Unified phenotype ontology (uPheno) | ||
title: Unified Phenotype Ontology (uPheno) | ||
build: | ||
method: archive | ||
path: archive/ontology | ||
source_url: http://build.berkeleybop.org/job/build-pheno-ontologies/lastSuccessfulBuild/artifact/*zip*/archive.zip | ||
contact: | ||
email: [email protected] | ||
github: nicolevasilevsky | ||
label: Nicole Vasilevsky | ||
orcid: 0000-0001-5208-3432 | ||
email: [email protected] | ||
github: jamesamcl | ||
label: James McLaughlin | ||
orcid: 0000-0002-8361-2795 | ||
description: The uPheno ontology integrates multiple phenotype ontologies into a unified cross-species phenotype ontology. | ||
domain: phenotype | ||
homepage: https://github.com/obophenotype/upheno | ||
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@@ -30,9 +30,11 @@ products: | |
page: https://github.com/obophenotype/upheno/tree/master/hp-mp | ||
- id: upheno/v2/upheno.owl | ||
title: uPheno 2 | ||
description: The new version of uPheno, along with species independent phenotypes amd additional phenotype relations. The ontology is still in Beta status, but we recommend users to migrate their infrastructures to uPheno 2 as uPheno 1 is no longer actively maintained. | ||
description: The new version of uPheno, along with species independent phenotypes and additional phenotype relations. The ontology is still in Beta status, but we recommend users to migrate their infrastructures to uPheno 2 as uPheno 1 is no longer actively maintained. | ||
page: https://github.com/obophenotype/upheno-dev | ||
publications: | ||
- id: https://doi.org/10.1101/2024.09.18.613276 | ||
title: The Unified Phenotype Ontology (uPheno): A framework for cross-species integrative phenomics | ||
- id: https://zenodo.org/record/2382757 | ||
title: Phenotype Ontologies Traversing All The Organisms (POTATO) workshop aims to reconcile logical definitions across species | ||
- id: https://zenodo.org/record/3352149 | ||
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