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Update upheno.md
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jamesamcl authored Nov 5, 2024
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---
layout: ontology_detail
id: upheno
title: Unified phenotype ontology (uPheno)
title: Unified Phenotype Ontology (uPheno)
build:
method: archive
path: archive/ontology
source_url: http://build.berkeleybop.org/job/build-pheno-ontologies/lastSuccessfulBuild/artifact/*zip*/archive.zip
contact:
email: [email protected]
github: nicolevasilevsky
label: Nicole Vasilevsky
orcid: 0000-0001-5208-3432
email: [email protected]
github: jamesamcl
label: James McLaughlin
orcid: 0000-0002-8361-2795
description: The uPheno ontology integrates multiple phenotype ontologies into a unified cross-species phenotype ontology.
domain: phenotype
homepage: https://github.com/obophenotype/upheno
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page: https://github.com/obophenotype/upheno/tree/master/hp-mp
- id: upheno/v2/upheno.owl
title: uPheno 2
description: The new version of uPheno, along with species independent phenotypes amd additional phenotype relations. The ontology is still in Beta status, but we recommend users to migrate their infrastructures to uPheno 2 as uPheno 1 is no longer actively maintained.
description: The new version of uPheno, along with species independent phenotypes and additional phenotype relations. The ontology is still in Beta status, but we recommend users to migrate their infrastructures to uPheno 2 as uPheno 1 is no longer actively maintained.
page: https://github.com/obophenotype/upheno-dev
publications:
- id: https://doi.org/10.1101/2024.09.18.613276
title: The Unified Phenotype Ontology (uPheno): A framework for cross-species integrative phenomics
- id: https://zenodo.org/record/2382757
title: Phenotype Ontologies Traversing All The Organisms (POTATO) workshop aims to reconcile logical definitions across species
- id: https://zenodo.org/record/3352149
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