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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -1,79 +1,83 @@ | ||
| >hidden_state | ||
| >input_current | ||
| >input_generation_settings | ||
| |-->baseline | ||
| |-->amplitude_scaling | ||
| |-->tau | ||
| |-->mean_firing_rate | ||
| |-->sampling_rate | ||
| |-->duration | ||
| |-->FLAG_convert_to_amphere | ||
| |-->condition | ||
| |-->experimentname | ||
| |-->experimentername | ||
| |-->experimentnr | ||
| |-->trialnr | ||
| >membrane_potential | ||
| >spikeindices | ||
| >thresholds | ||
| >thresholdindices | ||
| >classification | ||
| >classification/apwidth | ||
| |-->ahpamp | ||
| |-->meanspike | ||
| |-->v | ||
| |-->spikeindex | ||
| |-->threshold | ||
| |-->thresholdindex | ||
| |-->apwidth | ||
| |-->ahpamp | ||
| >firing_rate | ||
| >mean_threshold | ||
| >Analysis | ||
| >sta | ||
| |-->ic | ||
| |-->ic/raw | ||
| |-->ic/cor | ||
| |-->ic/correg | ||
| |-->ic/priorPV | ||
| |-->ic/STPV | ||
| |-->ic/normalized_peakdistance | ||
| |-->x | ||
| |-->raw | ||
| |-->cor | ||
| |-->correg | ||
| |-->priorPV | ||
| |-->STPV | ||
| |-->normalized_peakdistance | ||
| >Analysis_Settings | ||
| |-->threshold | ||
| |-->thresholdmethod | ||
| |-->searchthreshold | ||
| |-->thresholdwindow | ||
| |-->refractory_period | ||
| |-->derthreshold | ||
| |-->MIanalysis | ||
| |-->windowtype | ||
| |-->windowsize | ||
| |-->factor_ron_roff | ||
| |-->staparams | ||
| |-->ic | ||
| |-->normalize | ||
| |-->lambda_original | ||
| |-->window | ||
| |-->factor_downsampling | ||
| |-->lambdaI | ||
| |-->projection_whichsta | ||
| |-->x | ||
| |-->normalize | ||
| |-->lambda_original | ||
| |-->window | ||
| |-->factor_downsampling | ||
| |-->lambdaI | ||
| |-->projection_whichsta | ||
| |-->classification | ||
| |-->window | ||
| |-->stdwindow | ||
| |-->minisi | ||
| |-->saveindividualsettings | ||
| >normalized_trial | ||
|
|
||
| Each cell data contains multiple trials. Each trial has the structure diplayed below: | ||
|
|
||
| > data_index (dict) | ||
| |->hidden_state (array) | ||
| |->input_current (array) | ||
| |->input_generation_settings (dict) | ||
| |-->baseline | ||
| |-->amplitude_scaling | ||
| |-->tau | ||
| |-->mean_firing_rate | ||
| |-->sampling_rate | ||
| |-->duration | ||
| |-->FLAG_convert_to_amphere | ||
| |-->condition | ||
| |-->experimentname | ||
| |-->experimentername | ||
| |-->experimentnr | ||
| |-->trialnr | ||
| |->membrane_potential (array) | ||
| |->spikeindices (array) | ||
| |->thresholds (array) | ||
| |->thresholdindices (array) | ||
| |->classification | ||
| |->classification/apwidth (dict) | ||
| |-->ahpamp | ||
| |-->meanspike (dict) | ||
| |-->v | ||
| |-->spikeindex | ||
| |-->threshold | ||
| |-->thresholdindex | ||
| |-->apwidth | ||
| |-->ahpamp | ||
| |->firing_rate | ||
| |->mean_threshold | ||
| |->Analysis | ||
| |->sta (dict) | ||
| |-->ic | ||
| |-->ic/raw | ||
| |-->ic/cor | ||
| |-->ic/correg | ||
| |-->ic/priorPV | ||
| |-->ic/STPV | ||
| |-->ic/normalized_peakdistance | ||
| |-->x | ||
| |-->raw | ||
| |-->cor | ||
| |-->correg | ||
| |-->priorPV | ||
| |-->STPV | ||
| |-->normalized_peakdistance | ||
| |->Analysis_Settings (dict) | ||
| |-->threshold | ||
| |-->thresholdmethod | ||
| |-->searchthreshold | ||
| |-->thresholdwindow | ||
| |-->refractory_period | ||
| |-->derthreshold | ||
| |-->MIanalysis (dict) | ||
| |-->windowtype | ||
| |-->windowsize | ||
| |-->factor_ron_roff | ||
| |-->staparams (dict) | ||
| |-->ic (dict) | ||
| |-->normalize | ||
| |-->lambda_original | ||
| |-->window | ||
| |-->factor_downsampling | ||
| |-->lambdaI | ||
| |-->projection_whichsta | ||
| |-->x (dict) | ||
| |-->normalize | ||
| |-->lambda_original | ||
| |-->window | ||
| |-->factor_downsampling | ||
| |-->lambdaI | ||
| |-->projection_whichsta | ||
| |-->classification (dict) | ||
| |-->window | ||
| |-->stdwindow | ||
| |-->minisi | ||
| |-->saveindividualsettings | ||
| |->normalized_trial (array) |