feat(biosimulations): update tests to correctly refer to test file

NeuroML · Apr 23, 2024 · c796130 · c796130
1 parent 811f0e9
commit c796130
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Showing 2 changed files with 10 additions and 11 deletions.
diff --git a/pyneuroml/biosimulations.py b/pyneuroml/biosimulations.py
@@ -203,15 +203,17 @@ def submit_simulation_archive(
     logger.debug(f"Sim dict is: {sim_dict}")
 
     simulation_run_request = _SimulationRunApiRequest(**sim_dict)
-    logger.debug(f"simulation_run_request is {simulation_run_request.json()}")
+    logger.debug(
+        f"simulation_run_request is {simulation_run_request.model_dump_json()}"
+    )
 
     with open(archive_file, "rb") as archive_file_handle:
         multipart_form_data: dict[
             str,
             typing.Union[typing.Tuple[str, typing.BinaryIO], typing.Tuple[None, str]],
         ] = {
             "file": (archive_file, archive_file_handle),
-            "simulationRun": (None, simulation_run_request.json()),
+            "simulationRun": (None, simulation_run_request.model_dump_json()),
         }
 
         logger.debug(f"data is:\n{multipart_form_data}")

diff --git a/tests/test_biosimulations.py b/tests/test_biosimulations.py
@@ -10,6 +10,7 @@
 
 import logging
 import os
+import pathlib
 
 from pyneuroml.biosimulations import (
     get_simulator_versions,
@@ -46,21 +47,16 @@ def test_get_simulator_versions(self):
             versions = simulators[s]
             self.assertGreater(len(versions), 0)
 
-    def test_submit_simulation(self):
-        """Test submit_simulation"""
-        os.chdir("examples")
-        response = submit_simulation(
-            "LEMS_NML2_Ex5_DetCell.xml", sim_dict={}, dry_run=True
-        )
-        self.assertTrue(response)
-
     def test_submit_simulation_archive(self):
         """Test submit_simulation_archive"""
         # TODO: we don't want to use the prod instance for testing, so currently
         # disabled. We'll point it at a dev instance for testingo
         # Manually set to False to test.
         dry_run = True
-        os.chdir("examples")
+        thispath = pathlib.Path(__file__)
+        dirname = str(thispath.parent.parent)
+        cwd = os.getcwd()
+        os.chdir(dirname + "/examples")
         sim_dict = {
             "name": "PyNeuroML test simulation",
             "simulator": "neuron",
@@ -71,6 +67,7 @@ def test_submit_simulation_archive(self):
         response = submit_simulation(
             "LEMS_NML2_Ex5_DetCell.xml", sim_dict=sim_dict, dry_run=dry_run
         )
+        os.chdir(cwd)
 
         if dry_run:
             pass