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Philosopher 4.7.0

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@prvst prvst released this 23 Dec 16:53
· 192 commits to master since this release

Added

  • Adjusted the peptide-to-protein mapping due to I/L replacement rules
  • Adjusted the protein FDR calculation rules.

Changed

  • Removed the normalization done at the protein level in label quant
  • Improved the protein filter for small scale analyses

Fixed

  • Adjusted the msstats file format, added purity to all plex sizes
  • Fixed the protein coverage calculations
  • Fixed repeated isobaric values that would eventually show up in the protein table