Update dependencies to resolve deprecation warnings #1712

Job	Run time
unit_tests (3.8)	2m 4s
unit_tests (3.9)	2m 7s
unit_tests (3.10)	2m 12s
unit_tests (3.11)	2m 14s
unit_tests (3.12)	2m 39s
util_tests (3.8)	1m 47s
util_tests (3.9)	1m 44s
util_tests (3.10)	1m 48s
util_tests (3.11)	1m 55s
util_tests (3.12)	2m 22s
py_build_tests / py_build_tests	7s
py_build_tests / relative_path_tests	6s
docker_build_tests / docker_build_tests	23m 51s
	44m 56s

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