Add lane yield threshold for NovaSeqXPlus 25B FC

NationalGenomicsInfrastructure · Apr 7, 2024 · 993b059 · 993b059
1 parent 6c13a53
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diff --git a/VERSIONLOG.md b/VERSIONLOG.md
@@ -1,5 +1,9 @@
 # Scilifelab_epps Version Log
 
+## 20240407.1
+
+Add lane yield threshold for NovaSeqXPlus 25B FC
+
 ## 20240325.1
 
 Upgrade index_placement_checker to check expected index position

diff --git a/scripts/manage_demux_stats_thresholds.py b/scripts/manage_demux_stats_thresholds.py
@@ -35,6 +35,7 @@ def __init__(self, instrument, chemistry, paired, read_length):
             "NextSeq 2000 P3",
             "10B",
             "1.5B",
+            "25B",
         ]
 
         if (
@@ -138,6 +139,8 @@ def set_exp_lane_clust(self):
                 self.exp_lane_clust = 1000e6
             elif self.chemistry == "1.5B":
                 self.exp_lane_clust = 600e6
+            elif self.chemistry == "25B":
+                self.exp_lane_clust = 2500e6
         elif self.instrument == "NextSeq":
             if self.chemistry == "NextSeq Mid":
                 self.exp_lane_clust = 25e6