Geneformer modelcard and loss eval script #392
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jstjohn
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docs/docs/assets/images/geneformer/loss_curve_new_v_old_geneformer_64_node_10M.png
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sub-packages/bionemo-geneformer/src/bionemo/geneformer/scripts/geneformer_mlm_loss_eval.py
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sub-packages/bionemo-geneformer/src/bionemo/geneformer/scripts/geneformer_mlm_loss_eval.py
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sub-packages/bionemo-geneformer/src/bionemo/geneformer/scripts/geneformer_mlm_loss_eval.py
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sub-packages/bionemo-geneformer/src/bionemo/geneformer/scripts/geneformer_mlm_loss_eval.py
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…hn/geneformer_modelcard
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pstjohn
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Nov 5, 2024
sub-packages/bionemo-geneformer/src/bionemo/geneformer/scripts/geneformer_mlm_loss_eval.py
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sub-packages/bionemo-geneformer/src/bionemo/geneformer/scripts/geneformer_mlm_loss_eval.py
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Co-authored-by: Peter St. John <[email protected]> Signed-off-by: John St. John <[email protected]>
polinabinder1
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Nov 5, 2024
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skothenhill-nv
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Summary
Port the geneformer loss eval script over from bionemo1, and update the model card with new numbers and results.