Update to v0.4.2

NREL · Aug 19, 2024 · 740384d · 740384d
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Showing 29 changed files with 33 additions and 33 deletions.
diff --git a/README.md b/README.md
@@ -12,14 +12,14 @@ using pip (https://pip.pypa.io/en/stable/cli/pip_install/):
 
 ```sh
 python -m pip install
-https://github.com/NREL/bbopt/archive/refs/tags/v0.4.1.tar.gz
+https://github.com/NREL/bbopt/archive/refs/tags/v0.4.2.tar.gz
 ```
 
 using conda (https://docs.anaconda.com/working-with-conda/packages/install-packages/):
 
 ```sh
 conda install
-https://github.com/NREL/bbopt/archive/refs/tags/v0.4.1.tar.gz
+https://github.com/NREL/bbopt/archive/refs/tags/v0.4.2.tar.gz
 ```
 
 ### From source

diff --git a/blackboxopt/__init__.py b/blackboxopt/__init__.py
@@ -16,7 +16,7 @@
 # along with this program.  If not, see <http://www.gnu.org/licenses/>.
 
 __all__ = ["acquisition", "optimize", "sampling", "rbf"]
-__version__ = "0.4.1"
+__version__ = "0.4.2"
 
 from . import acquisition
 from . import optimize

diff --git a/blackboxopt/acquisition.py b/blackboxopt/acquisition.py
@@ -31,7 +31,7 @@
     "Haoyu Jia",
     "Weslley S. Pereira",
 ]
-__version__ = "0.4.1"
+__version__ = "0.4.2"
 __deprecated__ = False
 
 import numpy as np

diff --git a/blackboxopt/optimize.py b/blackboxopt/optimize.py
@@ -31,7 +31,7 @@
     "Haoyu Jia",
     "Weslley S. Pereira",
 ]
-__version__ = "0.4.1"
+__version__ = "0.4.2"
 __deprecated__ = False
 
 from typing import Callable, Optional, Union
@@ -781,9 +781,9 @@ def multistart_stochastic_response_surface(
         if out_local.fx < out.fx:
             out.x[:] = out_local.x
             out.fx = out_local.fx
-        out.samples[
-            out.nfev : out.nfev + out_local.nfev, :
-        ] = out_local.samples
+        out.samples[out.nfev : out.nfev + out_local.nfev, :] = (
+            out_local.samples
+        )
         out.fsamples[out.nfev : out.nfev + out_local.nfev] = out_local.fsamples
         out.nfev = out.nfev + out_local.nfev
 

diff --git a/blackboxopt/problem.py b/blackboxopt/problem.py
@@ -20,7 +20,7 @@
 __maintainer__ = "Weslley S. Pereira"
 __email__ = "[email protected]"
 __credits__ = ["Weslley S. Pereira"]
-__version__ = "0.4.1"
+__version__ = "0.4.2"
 __deprecated__ = False
 
 import numpy as np

diff --git a/blackboxopt/rbf.py b/blackboxopt/rbf.py
@@ -20,7 +20,7 @@
 __maintainer__ = "Weslley S. Pereira"
 __email__ = "[email protected]"
 __credits__ = ["Weslley S. Pereira"]
-__version__ = "0.4.1"
+__version__ = "0.4.2"
 __deprecated__ = False
 
 from typing import Optional

diff --git a/blackboxopt/sampling.py b/blackboxopt/sampling.py
@@ -31,7 +31,7 @@
     "Haoyu Jia",
     "Weslley S. Pereira",
 ]
-__version__ = "0.4.1"
+__version__ = "0.4.2"
 __deprecated__ = False
 
 import numpy as np

diff --git a/docs/conf.py b/docs/conf.py
@@ -17,7 +17,7 @@
 project = "Black-box Opt"
 copyright = "2024, Alliance for Sustainable Energy, LLC"
 author = "Weslley S. Pereira"
-release = "0.4.1"
+release = "0.4.2"
 
 # -- General configuration ---------------------------------------------------
 # https://www.sphinx-doc.org/en/master/usage/configuration.html#general-configuration

diff --git a/examples/multiobj/pareto_front.ipynb b/examples/multiobj/pareto_front.ipynb
@@ -29,7 +29,7 @@
     "__maintainer__ = \"Weslley S. Pereira\"\n",
     "__email__ = \"[email protected]\"\n",
     "__credits__ = [\"Weslley S. Pereira\"]\n",
-    "__version__ = \"0.4.1\"\n",
+    "__version__ = \"0.4.2\"\n",
     "__deprecated__ = False"
    ]
   },

diff --git a/examples/multiobj/socemo.ipynb b/examples/multiobj/socemo.ipynb
@@ -28,7 +28,7 @@
     "__maintainer__ = \"Weslley S. Pereira\"\n",
     "__email__ = \"[email protected]\"\n",
     "__credits__ = [\"Weslley S. Pereira\"]\n",
-    "__version__ = \"0.4.1\"\n",
+    "__version__ = \"0.4.2\"\n",
     "__deprecated__ = False"
    ]
   },

diff --git a/examples/opt_with_constr/example_gosac_1.py b/examples/opt_with_constr/example_gosac_1.py
@@ -20,7 +20,7 @@
 __maintainer__ = "Weslley S. Pereira"
 __email__ = "[email protected]"
 __credits__ = ["Juliane Mueller", "Weslley S. Pereira"]
-__version__ = "0.4.1"
+__version__ = "0.4.2"
 __deprecated__ = False
 
 from blackboxopt.optimize import gosac

diff --git a/examples/opt_with_constr/example_gosac_2.py b/examples/opt_with_constr/example_gosac_2.py
@@ -20,7 +20,7 @@
 __maintainer__ = "Weslley S. Pereira"
 __email__ = "[email protected]"
 __credits__ = ["Juliane Mueller", "Weslley S. Pereira"]
-__version__ = "0.4.1"
+__version__ = "0.4.2"
 __deprecated__ = False
 
 from blackboxopt.optimize import gosac

diff --git a/examples/sampling.ipynb b/examples/sampling.ipynb
@@ -28,7 +28,7 @@
     "__maintainer__ = \"Weslley S. Pereira\"\n",
     "__email__ = \"[email protected]\"\n",
     "__credits__ = [\"Weslley S. Pereira\"]\n",
-    "__version__ = \"0.4.1\"\n",
+    "__version__ = \"0.4.2\"\n",
     "__deprecated__ = False"
    ]
   },

diff --git a/examples/single_obj_rbf/LocalStochRBFstop.py b/examples/single_obj_rbf/LocalStochRBFstop.py
@@ -26,7 +26,7 @@
     "Haoyu Jia",
     "Weslley S. Pereira",
 ]
-__version__ = "0.4.1"
+__version__ = "0.4.2"
 __deprecated__ = False
 
 from optprogram1 import read_check_data_file

diff --git a/examples/single_obj_rbf/compareLearningStrategies.py b/examples/single_obj_rbf/compareLearningStrategies.py
@@ -20,7 +20,7 @@
 __maintainer__ = "Weslley S. Pereira"
 __email__ = "[email protected]"
 __credits__ = ["Weslley S. Pereira"]
-__version__ = "0.4.1"
+__version__ = "0.4.2"
 __deprecated__ = False
 
 

diff --git a/examples/single_obj_rbf/data.py b/examples/single_obj_rbf/data.py
@@ -26,7 +26,7 @@
     "Haoyu Jia",
     "Weslley S. Pereira",
 ]
-__version__ = "0.4.1"
+__version__ = "0.4.2"
 __deprecated__ = False
 
 from dataclasses import dataclass

diff --git a/examples/single_obj_rbf/datainput_Branin.py b/examples/single_obj_rbf/datainput_Branin.py
@@ -26,7 +26,7 @@
     "Haoyu Jia",
     "Weslley S. Pereira",
 ]
-__version__ = "0.4.1"
+__version__ = "0.4.2"
 __deprecated__ = False
 
 import numpy as np

diff --git a/examples/single_obj_rbf/datainput_BraninWithInteger.py b/examples/single_obj_rbf/datainput_BraninWithInteger.py
@@ -26,7 +26,7 @@
     "Haoyu Jia",
     "Weslley S. Pereira",
 ]
-__version__ = "0.4.1"
+__version__ = "0.4.2"
 __deprecated__ = False
 
 import numpy as np

diff --git a/examples/single_obj_rbf/datainput_hartman3.py b/examples/single_obj_rbf/datainput_hartman3.py
@@ -26,7 +26,7 @@
     "Haoyu Jia",
     "Weslley S. Pereira",
 ]
-__version__ = "0.4.1"
+__version__ = "0.4.2"
 __deprecated__ = False
 
 import numpy as np

diff --git a/examples/single_obj_rbf/datainput_rastrigin.py b/examples/single_obj_rbf/datainput_rastrigin.py
@@ -26,7 +26,7 @@
     "Haoyu Jia",
     "Weslley S. Pereira",
 ]
-__version__ = "0.4.1"
+__version__ = "0.4.2"
 __deprecated__ = False
 
 import numpy as np

diff --git a/examples/single_obj_rbf/optprogram1.py b/examples/single_obj_rbf/optprogram1.py
@@ -31,7 +31,7 @@
     "Haoyu Jia",
     "Weslley S. Pereira",
 ]
-__version__ = "0.4.1"
+__version__ = "0.4.2"
 __deprecated__ = False
 
 

diff --git a/examples/vlse_benchmark/vlse_bench.ipynb b/examples/vlse_benchmark/vlse_bench.ipynb
@@ -28,7 +28,7 @@
     "__maintainer__ = \"Weslley S. Pereira\"\n",
     "__email__ = \"[email protected]\"\n",
     "__credits__ = [\"Weslley S. Pereira\"]\n",
-    "__version__ = \"0.4.1\"\n",
+    "__version__ = \"0.4.2\"\n",
     "__deprecated__ = False"
    ]
   },

diff --git a/examples/vlse_benchmark/vlse_bench.py b/examples/vlse_benchmark/vlse_bench.py
@@ -20,7 +20,7 @@
 __maintainer__ = "Weslley S. Pereira"
 __email__ = "[email protected]"
 __credits__ = ["Weslley S. Pereira"]
-__version__ = "0.4.1"
+__version__ = "0.4.2"
 __deprecated__ = False
 
 import os

diff --git a/pyproject.toml b/pyproject.toml
@@ -1,6 +1,6 @@
 [project]
 name = "blackboxopt"
-version = "0.4.1"
+version = "0.4.2"
 description = "Surrogate models and active learning for scientific applications"
 authors = [
     {name = "Weslley da Silva Pereira", email = "[email protected]"},

diff --git a/tests/test_optimize.py b/tests/test_optimize.py
@@ -20,7 +20,7 @@
 __maintainer__ = "Weslley S. Pereira"
 __email__ = "[email protected]"
 __credits__ = ["Weslley S. Pereira"]
-__version__ = "0.4.1"
+__version__ = "0.4.2"
 __deprecated__ = False
 
 import numpy as np

diff --git a/tests/test_rbf.py b/tests/test_rbf.py
@@ -20,7 +20,7 @@
 __maintainer__ = "Weslley S. Pereira"
 __email__ = "[email protected]"
 __credits__ = ["Weslley S. Pereira"]
-__version__ = "0.4.1"
+__version__ = "0.4.2"
 __deprecated__ = False
 
 import numpy as np

diff --git a/tests/test_sampling.py b/tests/test_sampling.py
@@ -20,7 +20,7 @@
 __maintainer__ = "Weslley S. Pereira"
 __email__ = "[email protected]"
 __credits__ = ["Weslley S. Pereira"]
-__version__ = "0.4.1"
+__version__ = "0.4.2"
 __deprecated__ = False
 
 import numpy as np

diff --git a/tests/test_vlse_bench.py b/tests/test_vlse_bench.py
@@ -20,7 +20,7 @@
 __maintainer__ = "Weslley S. Pereira"
 __email__ = "[email protected]"
 __credits__ = ["Weslley S. Pereira"]
-__version__ = "0.4.1"
+__version__ = "0.4.2"
 __deprecated__ = False
 
 from copy import deepcopy

diff --git a/tests/vlse_benchmark/__init__.py b/tests/vlse_benchmark/__init__.py
@@ -27,7 +27,7 @@
 __maintainer__ = "Weslley S. Pereira"
 __email__ = "[email protected]"
 __credits__ = ["Sonja Surjanovic", "Derek Bingham", "Weslley S. Pereira"]
-__version__ = "0.4.1"
+__version__ = "0.4.2"
 __deprecated__ = False
 
 from rpy2.robjects import r