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Mixed precision monin_obukhov #1116

Merged
merged 88 commits into from
Jul 28, 2023
Merged

Mixed precision monin_obukhov #1116

merged 88 commits into from
Jul 28, 2023

Commits on Jan 20, 2023

  1. Merge mixedmode

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  2. Remove subroutines/functions from incorrect files

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  3. Add platform_mod

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  4. Changes interface precision

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  5. Adds public interfaces

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  6. Adds #include statements

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  7. Adds header files

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  8. Adds new files

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Commits on Jan 23, 2023

  1. Adds double precision

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  2. Change routine/function name to macros

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    mcallic2 committed Jan 23, 2023
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  3. Adds mixed precision

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Commits on Jan 24, 2023

  1. Adds dimension size changing loop

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  2. Merge branch 'NOAA-GFDL:main' into monin_obukhov

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  3. Changes interface call naming

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Commits on Jan 25, 2023

  1. Removes unnecessary precision

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  2. Fixes module variable precision

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  3. Merge branch 'main' of github.com:mcallic2/FMS into monin_obukhov

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  4. Merge branch 'monin_obukhov' of github.com:mcallic2/FMS into monin_ob… 

    …ukhov
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  5. Removes trailing whitespace

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  6. Fixes long lines

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  7. Fixes more long lines

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  8. Changes for cmake

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Commits on Feb 1, 2023

  1. fix: misspellings and rename variable in yaml_parser.F90 (NOAA-GFDL#1127 

    )
    @J-Lentz
    J-Lentz authored Feb 1, 2023
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  2. fix: module and local variable name conflicts in time_interp (NOAA-GF… 

    …DL#1125)

Co-authored-by: mlee03 <[email protected]>
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  3. docs: Correct instructions to build without MPI (NOAA-GFDL#1128)

    @J-Lentz
    J-Lentz authored Feb 1, 2023
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Commits on Feb 8, 2023

  1. Merge mixedmode updated

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Commits on Feb 9, 2023

  1. fix: pointer to allocatable in amip_interp_type (NOAA-GFDL#1106)

    @ganganoaa
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Commits on Feb 14, 2023

  1. feat: log_diag_field_info updates from diag rewrite (NOAA-GFDL#1117)

    @rem1776
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Commits on Feb 16, 2023

  1. fix: remove implied save for valid_types variables in sat_vapor_pres_k ( 

    NOAA-GFDL#1120)
    @uramirez8707
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  2. revert: log_diag_field_info argument changes (NOAA-GFDL#1136) 

    Co-authored-by: rem1776 <[email protected]>
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Commits on Feb 23, 2023

  1. Changes for expoential value precsion

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  2. feat: refactored send_data math (field buffer update) functions. (NOA… 

    …A-GFDL#1131)
    @ngs333
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Commits on Feb 24, 2023

  1. Change character line length

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  2. Fixes missed exponentials and comments

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  3. Missed real values

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  4. Changes implicit casting to explicit casting

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Commits on Feb 27, 2023

  1. fix: adds tags to nested do loops in fms_diag_fieldbuff.fh to fix his… 

    …tory file issues (NOAA-GFDL#1139)
    @ngs333
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Commits on Mar 9, 2023

  1. fix - gnu and pgi issue with class(*) in send_data3d (NOAA-GFDL#1149)

    @nikizadehgfdl
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  2. feat: extend string interface in fms_string_utils_mod (NOAA-GFDL#… 

    …1142)
    @J-Lentz
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  3. fix: add omp directives for race condition in tridiagonal (NOAA-GFDL#… 

    …1109)
    @ganganoaa
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Commits on Mar 13, 2023

  1. fix: missing if statement in PR NOAA-GFDL#1149 (NOAA-GFDL#1155)

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Commits on Mar 28, 2023

  1. fix: time_manager missing changes from year to yr, month to mo, day t… 

    …o dy (NOAA-GFDL#1169)
    @mlee03
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Commits on Apr 3, 2023

  1. chore: update changelog and version numbers for release (NOAA-GFDL#1167)

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Commits on Apr 6, 2023

  1. chore: append dev to version number post-release (NOAA-GFDL#1179)

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Commits on Jun 4, 2023

  1. merge mixedmode

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  2. Removes unecessary path

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  3. Removes repeated lines from .F90 file

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  4. Removes repeated lines from .F90 file

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  5. Removes old include files

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Commits on Jun 16, 2023

  1. feat: merge 2023.01.01 changes into main (NOAA-GFDL#1259) 

    * fix: fms2 io performance update for domain_reads (NOAA-GFDL#1226)

* fix: fms2 io performance update for compressed writes (NOAA-GFDL#1227)

* chore: build/log updates for patch (NOAA-GFDL#1247)

Co-authored-by: uramirez8707 <[email protected]>
Co-authored-by: rem1776 <[email protected]>
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  2. feat: mixed precision for axis_utils2, horiz_interp, sat_vapor_pressu… 

    …re, and fms_mod (NOAA-GFDL#1239) (NOAA-GFDL#1258)

* feat: mixed precision axis_utils2 (NOAA-GFDL#1104)

* feat: mixed precision fms_mod (NOAA-GFDL#1147)

* feat: horiz interp mixed precision (NOAA-GFDL#1067)

* mixed precision sat_vapor_pressure  (NOAA-GFDL#1095)

* feat: add mixed precision axis_utils unit tests (NOAA-GFDL#1172)

* fix: move type definitions to before first usage to fix nvhpc bug (NOAA-GFDL#1187)

* fix: change allocatable type for intel errors (NOAA-GFDL#1221)

Co-authored-by: Caitlyn McAllister <[email protected]>
Co-authored-by: Jesse Lentz <[email protected]>
Co-authored-by: MiKyung Lee <[email protected]>
    @rem1776 @mcallic2
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  3. fix: replace current_peset_num with 'n' which should be the active pe… 

    …list. (NOAA-GFDL#1246)
    @dkokron
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  4. fix: gcc class(*) bug workaround for character arrays (NOAA-GFDL#1163)

    @laurenchilutti
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  5. fix: improve error messages in fms2_io (NOAA-GFDL#1183)

    @uramirez8707
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  6. feat: fms2_io unpack data (NOAA-GFDL#1231)

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Commits on Jun 20, 2023

  1. fix: improve doxygen comment for tranlon (NOAA-GFDL#1257)

    @J-Lentz
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  2. fix: ifort 2022.3.0 & greater ICE bug in alltoall test + missing inpu… 

    …t nmls in mpp scripts (NOAA-GFDL#1158)
    @rem1776
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  3. fix: checks placed before allocating pointers passed into routines (N… 

    …OAA-GFDL#1152)
    @ganganoaa
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Commits on Jun 27, 2023

  1. fix: continuation line syntax for fms2_io error messages (NOAA-GFDL#1265 

    )
    @J-Lentz
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Commits on Jun 29, 2023

  1. fix: update doc site deployment action(NOAA-GFDL#1078)

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  2. fix: warnings in test_mpp_nesting.F90 (NOAA-GFDL#1118)

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Commits on Jun 30, 2023

  1. chore!: deprecate fms/mpp_io with use_deprecated_io macro (NOAA-GFDL#… 

    …1064)

BREAKING CHANGE: This commit removes mpp_io_mod and fms_io_mod, along with other routines that use the modules, from default compilation. The -Duse_deprecated_io CPP flag or --enable-deprecated-io configure time flag can be used to enable their compilation.
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  2. fix: field exists check for io update (NOAA-GFDL#1193)

    @J-Lentz
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  3. fix: diag_fieldbuff_update module dependency in Makefile.am (NOAA-GFD… 

    …L#1266)
    @ngs333
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  4. chore: add deprecated io options to build systems and CI (NOAA-GFDL#1063 

    )
    @rem1776
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Commits on Jul 5, 2023

  1. fix: test errors from io flag (NOAA-GFDL#1271)

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Commits on Jul 6, 2023

  1. changes format of exponential numbers

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Commits on Jul 11, 2023

  1. CI: update oneapi container version (NOAA-GFDL#1277)

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Commits on Jul 13, 2023

  1. refactor: monin_obukhov_stable_mix calls from stable_mix_1d (NOAA… 

    …-GFDL#1268)
    @J-Lentz
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  2. fix: out-of-bounds memory access in axis_utils2 (NOAA-GFDL#1157)

    @J-Lentz
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  3. fix: maximize system stacksize limit in fms_init (NOAA-GFDL#1233)

    @J-Lentz
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  4. test: remove stack limit checks in test scripts (NOAA-GFDL#1280)

    @rem1776
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  5. fix: mpp global arrays test fixes (NOAA-GFDL#1174)

    @rem1776
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  6. feat: update mpp_do_update_ad.fh to resolve JEDI requirement (NOAA-GF… 

    …DL#1225)
    @jkbk2004
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  7. chore: add prefixed aliases for libfms routines (NOAA-GFDL#1262) 

    BREAKING CHANGE: Any code using the global fms module (libFMS.F90) will break as this adds prefixes to all names in that module.
    @rem1776
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Commits on Jul 19, 2023

  1. exponentials with kind parameter

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  2. missed exponential

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  3. split mo_integral interface into two, also missed a comma from last c… 

    …ommit
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Commits on Jul 27, 2023

  1. merge mixedmode

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  2. merge main

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  3. merge conflicts can be hard

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  4. removes unnessary precision

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Commits on Jul 28, 2023

  1. Merge branch 'mixedmode' into monin_obukhov

    @mcallic2
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  2. merge mixedmode

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  3. git confusion

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  4. merge confict

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  5. put these back

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  6. because jesse told me too

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