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Update UPP modulefile on Hera, Orion and Hercules with the spack-stac…
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…k-1.5.0 (#816)

* Update modulefiles on Hera with the spack-stack.

* Update with the latest spack-stack on Hera

* update orion.lua with spack-stack

* Add changes for Hercules

* Update ci/rt.sh with the spack-stack-1.5.0 for Hera, Orion and Hercules

* Change prod-util/1.2.2 to prod_util/1.2.2 for Hera in ci/rt.sh
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@WenMeng-NOAA
WenMeng-NOAA authored Nov 7, 2023
1 parent 7fbc413 commit 78f369b
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Showing 5 changed files with 78 additions and 172 deletions.
21 changes: 9 additions & 12 deletions ci/rt.sh
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Expand Up @@ -65,28 +65,25 @@ if [ $mac2 = hf ]; then # for HERA
export machine=HERA
export homedir=${homedir:-"/scratch2/NAGAPE/epic/UPP/test_suite"}
export rundir=${rundir:-"/scratch1/NCEPDEV/stmp2/${USER}"}
module use /scratch1/NCEPDEV/nems/role.epic/hpc-stack/libs/intel-2022.1.2/modulefiles/stack
module load hpc/1.2.0
module load hpc-intel/2022.1.2
module load hpc-impi/2022.1.2
module load prod_util
module use /scratch1/NCEPDEV/nems/role.epic/spack-stack/spack-stack-1.5.0/envs/unified-env-noavx512/install/modulefiles/Core
module load stack-intel/2021.5.0
module load stack-intel-oneapi-mpi/2021.5.1
module load prod_util/1.2.2
elif [ $mac = O ] ; then
export machine=ORION
export homedir=${homedir:-"/work/noaa/epic/UPP"}
export rundir=${rundir:-"/work2/noaa/stmp/$USER"}
module use /work/noaa/epic-ps/role-epic-ps/hpc-stack/libs/intel-2022.1.2/modulefiles/stack
module load hpc/1.2.0
module load hpc-intel/2022.1.2
module load hpc-impi/2022.1.2
module load prod_util/1.2.2
module use /work/noaa/epic/role-epic/spack-stack/orion/spack-stack-1.5.0/envs/unified-env/install/modulefiles/Core
module load stack-intel/2022.0.2
module load stack-intel-oneapi-mpi/2021.5.1
module load prod-util/1.2.2
elif [ $mac3 = herc ] ; then
export machine=HERCULES
export homedir=${homedir:-"/work/noaa/epic/UPP"}
export rundir=${rundir:-"/work2/noaa/stmp/$USER"}
module use /work/noaa/epic/role-epic/spack-stack/hercules/spack-stack-dev-20230717/envs/unified-env/install/modulefiles/Core
module use /work/noaa/epic/role-epic/spack-stack/hercules/spack-stack-1.5.0/envs/unified-env/install/modulefiles/Core
module load stack-intel/2021.9.0
module load stack-intel-oneapi-mpi/2021.9.0
module load jasper/2.0.32
module load prod-util/1.2.2
fi

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64 changes: 13 additions & 51 deletions modulefiles/hera.lua
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@@ -1,61 +1,23 @@
help([[
Load environment to build post on hera
Load environment to build UPP on hera
]])

cmake_ver=os.getenv("cmake_ver") or "3.20.1"

prepend_path("MODULEPATH", "/scratch1/NCEPDEV/nems/role.epic/spack-stack/spack-stack-1.5.0/envs/unified-env-noavx512/install/modulefiles/Core")

stack_intel_ver=os.getenv("stack_intel_ver") or "2021.5.0"
load(pathJoin("stack-intel", stack_intel_ver))

stack_impi_ver=os.getenv("stack_impi_ver") or "2021.5.1"
load(pathJoin("stack-intel-oneapi-mpi", stack_impi_ver))

cmake_ver=os.getenv("cmake_ver") or "3.23.1"
load(pathJoin("cmake", cmake_ver))

prepend_path("MODULEPATH", "/scratch1/NCEPDEV/nems/role.epic/hpc-stack/libs/intel-2022.1.2/modulefiles/stack")

hpc_ver=os.getenv("hpc_ver") or "1.2.0"
load(pathJoin("hpc", hpc_ver))

hpc_intel_ver=os.getenv("hpc_intel_ver") or "2022.1.2"
load(pathJoin("hpc-intel", hpc_intel_ver))
hpc_impi_ver=os.getenv("hpc_impi_ver") or "2022.1.2"
load(pathJoin("hpc-impi", hpc_impi_ver))

hdf5_ver=os.getenv("hdf5_ver") or "1.10.6"
load(pathJoin("hdf5", hdf5_ver))
netcdf_ver=os.getenv("netcdf_ver") or "4.7.4"
load(pathJoin("netcdf", netcdf_ver))

jasper_ver=os.getenv("jasper_ver") or "2.0.25"
load(pathJoin("jasper", jasper_ver))
libpng_ver=os.getenv("libpng_ver") or "1.6.37"
load(pathJoin("libpng", libpng_ver))
zlib_ver=os.getenv("zlib_ver") or "1.2.11"
load(pathJoin("zlib", zlib_ver))

g2_ver=os.getenv("g2_ver") or "3.4.5"
load(pathJoin("g2", g2_ver))
g2tmpl_ver=os.getenv("g2tmpl_ver") or "1.10.2"
load(pathJoin("g2tmpl", g2tmpl_ver))
bacio_ver=os.getenv("bacio_ver") or "2.4.1"
load(pathJoin("bacio", bacio_ver))
ip_ver=os.getenv("ip_ver") or "3.3.3"
load(pathJoin("ip", ip_ver))
sp_ver=os.getenv("sp_ver") or "2.3.3"
load(pathJoin("sp", sp_ver))
crtm_ver=os.getenv("crtm_ver") or "2.4.0"
load(pathJoin("crtm", crtm_ver))
w3emc_ver=os.getenv("w3emc_ver") or "2.9.2"
load(pathJoin("w3emc", w3emc_ver))

nemsio_ver=os.getenv("nemsio_ver") or "2.5.4"
load(pathJoin("nemsio", nemsio_ver))
sigio_ver=os.getenv("sigio_ver") or "2.3.2"
load(pathJoin("sigio", sigio_ver))
sfcio_ver=os.getenv("sfcio_ver") or "1.4.1"
load(pathJoin("sfcio", sfcio_ver))
wrf_io_ver=os.getenv("wrf_io_ver") or "1.2.0"
load(pathJoin("wrf_io", wrf_io_ver))
load("upp_common")

setenv("CC","mpiicc")
setenv("CXX","mpiicpc")
setenv("FC","mpiifort")

prepend_path("MODULEPATH", "/scratch2/BMC/ifi/modulefiles")
try_load("ifi/20230511-intel-2022.1.2")

whatis("Description: post build environment")
whatis("Description: UPP build environment")
73 changes: 12 additions & 61 deletions modulefiles/hercules.lua
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@@ -1,72 +1,23 @@
help([[
loads post prerequisites for Hercules/Intel
Load environment to build UPP on hecules
]])

prepend_path("MODULEPATH", "/work/noaa/epic/role-epic/spack-stack/hercules/spack-stack-dev-20230717/envs/unified-env/install/modulefiles/Core")

intel_ver=os.getenv("intel_ver") or "2021.9.0"
load(pathJoin("stack-intel", intel_ver))
prepend_path("MODULEPATH", "/work/noaa/epic/role-epic/spack-stack/hercules/spack-stack-1.5.0/envs/unified-env/install/modulefiles/Core")

mpi_ver=os.getenv("mpi_ver") or "2021.9.0"
load(pathJoin("stack-intel-oneapi-mpi", mpi_ver))
stack_intel_ver=os.getenv("stack_intel_ver") or "2021.9.0"
load(pathJoin("stack-intel", stack_intel_ver))

stack_impi_ver=os.getenv("stack_impi_ver") or "2021.9.0"
load(pathJoin("stack-intel-oneapi-mpi", stack_impi_ver))

cmake_ver=os.getenv("cmake_ver") or "3.23.1"
load(pathJoin("cmake", cmake_ver))

jasper_ver=os.getenv("jasper_ver") or "2.0.32"
load(pathJoin("jasper", jasper_ver))

zlib_ver=os.getenv("zlib_ver") or "1.2.13"
load(pathJoin("zlib", zlib_ver))

libpng_ver=os.getenv("libpng_ver") or "1.6.37"
load(pathJoin("libpng", libpng_ver))

hdf5_ver=os.getenv("hdf5_ver") or "1.14.1-2"
load(pathJoin("hdf5", hdf5_ver))

netcdf_c_ver=os.getenv("netcdf_c_ver") or "4.9.2"
load(pathJoin("netcdf-c", netcdf_c_ver))

netcdf_fortran_ver=os.getenv("netcdf_fortran_ver") or "4.6.0"
load(pathJoin("netcdf-fortran", netcdf_fortran_ver))

bacio_ver=os.getenv("bacio_ver") or "2.4.1"
load(pathJoin("bacio", bacio_ver))

crtm_ver=os.getenv("crtm_ver") or "2.4.0"
load(pathJoin("crtm", crtm_ver))

g2_ver=os.getenv("g2_ver") or "3.4.5"
load(pathJoin("g2", g2_ver))

g2tmpl_ver=os.getenv("g2tmpl_ver") or "1.10.2"
load(pathJoin("g2tmpl", g2tmpl_ver))

ip_ver=os.getenv("ip_ver") or "3.3.3"
load(pathJoin("ip", ip_ver))

sp_ver=os.getenv("sp_ver") or "2.3.3"
load(pathJoin("sp", sp_ver))

w3emc_ver=os.getenv("w3emc_ver") or "2.9.2"
load(pathJoin("w3emc", w3emc_ver))

nemsio_ver_ver=os.getenv("nemsio_ver") or "2.5.4"
load(pathJoin("nemsio", nemsio_ver))

sigio_ver=os.getenv("sigio_ver") or "2.3.2"
load(pathJoin("sigio", sigio_ver))

sfcio_ver=os.getenv("sfcio_ver") or "1.4.1"
load(pathJoin("sfcio", sfcio_ver))

wrf_io_ver=os.getenv("wrf_io_ver") or "1.2.0"
load(pathJoin("wrf-io", wrf_io_ver))
load("upp_common")

setenv("CC", "mpiicc")
setenv("CXX", "mpiicpc")
setenv("FC", "mpiifort")
setenv("CMAKE_Platform", "hercules.intel")
setenv("CC","mpiicc")
setenv("CXX","mpiicpc")
setenv("FC","mpiifort")

whatis("Description: POST build environment")
whatis("Description: UPP build environment")
61 changes: 13 additions & 48 deletions modulefiles/orion.lua
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@@ -1,58 +1,23 @@
help([[
Load environment to build post on orion
Load environment to build UPP on orion
]])

cmake_ver=os.getenv("cmake_ver") or "3.22.1"

prepend_path("MODULEPATH", "/work/noaa/epic/role-epic/spack-stack/orion/spack-stack-1.5.0/envs/unified-env/install/modulefiles/Core")

stack_intel_ver=os.getenv("stack_intel_ver") or "2022.0.2"
load(pathJoin("stack-intel", stack_intel_ver))

stack_impi_ver=os.getenv("stack_impi_ver") or "2021.5.1"
load(pathJoin("stack-intel-oneapi-mpi", stack_impi_ver))

cmake_ver=os.getenv("cmake_ver") or "3.23.1"
load(pathJoin("cmake", cmake_ver))

prepend_path("MODULEPATH", "/work/noaa/epic-ps/role-epic-ps/hpc-stack/libs/intel-2022.1.2/modulefiles/stack")

hpc_ver=os.getenv("hpc_ver") or "1.2.0"
load(pathJoin("hpc", hpc_ver))

hpc_intel_ver=os.getenv("hpc_intel_ver") or "2022.1.2"
load(pathJoin("hpc-intel", hpc_intel_ver))
hpc_impi_ver=os.getenv("hpc_impi_ver") or "2022.1.2"
load(pathJoin("hpc-impi", hpc_impi_ver))

hdf5_ver=os.getenv("hdf5_ver") or "1.10.6"
load(pathJoin("hdf5", hdf5_ver))
netcdf_ver=os.getenv("netcdf_ver") or "4.7.4"
load(pathJoin("netcdf", netcdf_ver))

jasper_ver=os.getenv("jasper_ver") or "2.0.25"
load(pathJoin("jasper", jasper_ver))
libpng_ver=os.getenv("libpng_ver") or "1.6.37"
load(pathJoin("libpng", libpng_ver))
zlib_ver=os.getenv("zlib_ver") or "1.2.11"
load(pathJoin("zlib", zlib_ver))

g2_ver=os.getenv("g2_ver") or "3.4.5"
load(pathJoin("g2", g2_ver))
g2tmpl_ver=os.getenv("g2tmpl_ver") or "1.10.2"
load(pathJoin("g2tmpl", g2tmpl_ver))
bacio_ver=os.getenv("bacio_ver") or "2.4.1"
load(pathJoin("bacio", bacio_ver))
ip_ver=os.getenv("ip_ver") or "3.3.3"
load(pathJoin("ip", ip_ver))
sp_ver=os.getenv("sp_ver") or "2.3.3"
load(pathJoin("sp", sp_ver))
crtm_ver=os.getenv("crtm_ver") or "2.4.0"
load(pathJoin("crtm", crtm_ver))
w3emc_ver=os.getenv("w3emc_ver") or "2.9.2"
load(pathJoin("w3emc", w3emc_ver))

nemsio_ver=os.getenv("nemsio_ver") or "2.5.4"
load(pathJoin("nemsio", nemsio_ver))
sigio_ver=os.getenv("sigio_ver") or "2.3.2"
load(pathJoin("sigio", sigio_ver))
sfcio_ver=os.getenv("sfcio_ver") or "1.4.1"
load(pathJoin("sfcio", sfcio_ver))
wrf_io_ver=os.getenv("wrf_io_ver") or "1.2.0"
load(pathJoin("wrf_io", wrf_io_ver))
load("upp_common")

setenv("CC","mpiicc")
setenv("CXX","mpiicpc")
setenv("FC","mpiifort")

whatis("Description: post build environment")
whatis("Description: UPP build environment")
31 changes: 31 additions & 0 deletions modulefiles/upp_common.lua
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@@ -0,0 +1,31 @@
whatis("Description: UPP build environment common libraries")

help([[Load UFS Model common libraries]])

local ufs_modules = {
{["jasper"] = "2.0.32"},
{["zlib"] = "1.2.13"},
{["libpng"] = "1.6.37"},
{["hdf5"] = "1.14.0"},
{["netcdf-c"] = "4.9.2"},
{["netcdf-fortran"] = "4.6.0"},
{["parallelio"] = "2.5.10"},
{["bacio"] = "2.4.1"},
{["crtm"] = "2.4.0"},
{["g2"] = "3.4.5"},
{["g2tmpl"] = "1.10.2"},
{["ip"] = "4.3.0"},
{["sp"] = "2.3.3"},
{["w3emc"] = "2.10.0"},
{["nemsio"] = "2.5.4"},
{["sigio"] = "2.3.2"},
{["sfcio"] = "1.4.1"},
{["wrf-io"] = "1.2.0"},
}

for i = 1, #ufs_modules do
for name, default_version in pairs(ufs_modules[i]) do
local env_version_name = string.gsub(name, "-", "_") .. "_ver"
load(pathJoin(name, os.getenv(env_version_name) or default_version))
end
end

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