Various fixes for using NAG #6
Workflow file for this run
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| # This is a CI workflow for the NCEPLIBS-bufr project. | |
| # | |
| # This workflow builds NCEPLIBS-bufr with Spack, including installing with the | |
| # "--test root" option to run the CTest suite. It also has a one-off job that | |
| # validates the recipe by ensuring that every CMake option that should be set | |
| # in the Spack recipe is so set. | |
| # | |
| # Alex Richert, Jan 2024 | |
| name: Spack | |
| on: | |
| push: | |
| branches: | |
| - develop | |
| pull_request: | |
| branches: | |
| - develop | |
| jobs: | |
| # This job builds with Spack using every combination of variants and runs the CTest suite each time | |
| Spack: | |
| strategy: | |
| matrix: | |
| os: ["ubuntu-latest"] | |
| variants: ["+python ~shared ~utils", "~python +shared +utils"] | |
| runs-on: ${{ matrix.os }} | |
| steps: | |
| - name: checkout-bufr | |
| uses: actions/checkout@v4 | |
| with: | |
| path: bufr | |
| - name: install-python | |
| if: ${{ contains(matrix.variants, '+python') }} | |
| run: | | |
| sudo apt install python3 python3-numpy meson | |
| - name: cache-data | |
| id: cache-data | |
| uses: actions/cache@v4 | |
| with: | |
| path: ~/data | |
| key: data-18 | |
| - name: spack-build-and-test | |
| run: | | |
| git clone -c feature.manyFiles=true https://github.com/spack/spack -b releases/v0.21 | |
| . spack/share/spack/setup-env.sh | |
| spack env create bufr-env $GITHUB_WORKSPACE/bufr/spack/spack.yaml | |
| spack env activate bufr-env | |
| cp $GITHUB_WORKSPACE/bufr/spack/package.py $SPACK_ROOT/var/spack/repos/builtin/packages/bufr/package.py | |
| spack develop --no-clone --path $GITHUB_WORKSPACE/bufr bufr@develop test_files=/home/runner/data | |
| spack add bufr@develop%gcc@12 ${{ matrix.variants }} | |
| spack external find cmake gmake python py-numpy meson | |
| spack concretize | |
| # Run installation and run CTest suite | |
| spack install --verbose --fail-fast --test root | |
| # Print test results | |
| #cat $(spack location -i bufr)/.spack/install-time-test-log.txt | |
| # Run 'spack load' and check that key build options were respected | |
| spack load bufr | |
| if [[ "${{ matrix.variants }}" =~ "+shared" ]]; then suffix="so" ; else suffix="a"; fi | |
| libvar=BUFR_LIB4 | |
| ls ${BUFR_LIB4} | grep -cE "/libbufr_4\."$suffix'$' | |
| - name: Upload test results | |
| uses: actions/upload-artifact@v4 | |
| if: ${{ failure() }} | |
| with: | |
| name: spackci-ctest-output-${{ matrix.os }}-${{ matrix.variants }} | |
| path: ${{ github.workspace }}/*/spack-build-*/Testing/Temporary/LastTest.log | |
| # This job validates the Spack recipe by making sure each cmake build option is represented | |
| recipe-check: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: checkout-bufr | |
| uses: actions/checkout@v4 | |
| with: | |
| path: bufr | |
| - name: recipe-check | |
| run: | | |
| echo "If this jobs fails, look at the most recently output CMake option below and make sure that option appears in spack/package.py" | |
| for opt in $(grep -ioP '^option\(\K(?!(ENABLE_DOCS))[^ ]+' $GITHUB_WORKSPACE/bufr/CMakeLists.txt) ; do | |
| echo "Checking for presence of '$opt' CMake option in package.py" | |
| grep -cP "define.+\b${opt}\b" $GITHUB_WORKSPACE/bufr/spack/package.py | |
| done |