correct archived parameter file to be api37.1

parameter_files/archive/api38.0.0_022025_params_default.cdl

@@ -747,6 +747,9 @@ variables:
 	double fates_damage_event_code ;
 		fates_damage_event_code:units = "unitless" ;
 		fates_damage_event_code:long_name = "Integer code that options how damage events are structured" ;
+	double fates_daylength_factor_switch ;
+		fates_daylength_factor_switch:units = "unitless" ;
+		fates_daylength_factor_switch:long_name = "user switch for turning on (1) or off (0) the day length factor scaling for photosynthetic parameters (ie scale vcmax and jmax)" ;
 	double fates_dev_arbitrary ;
 		fates_dev_arbitrary:units = "unknown" ;
 		fates_dev_arbitrary:long_name = "Unassociated free parameter that developers can use for testing arbitrary new hypotheses" ;
@@ -804,6 +807,9 @@ variables:
 	double fates_hydro_psicap ;
 		fates_hydro_psicap:units = "MPa" ;
 		fates_hydro_psicap:long_name = "sapwood water potential at which capillary reserves exhausted" ;
+	double fates_hydro_solver ;
+		fates_hydro_solver:units = "unitless" ;
+		fates_hydro_solver:long_name = "switch designating which numerical solver for plant hydraulics, 1 = 1D taylor, 2 = 2D Picard, 3 = 2D Newton (deprecated)" ;
 	double fates_landuse_grazing_carbon_use_eff ;
 		fates_landuse_grazing_carbon_use_eff:units = "unitless" ;
 		fates_landuse_grazing_carbon_use_eff:long_name = "carbon use efficiency of material eaten by grazers/browsers (i.e. amount in manure / amount consumed)" ;
@@ -849,18 +855,33 @@ variables:
 	double fates_leaf_photo_temp_acclim_timescale ;
 		fates_leaf_photo_temp_acclim_timescale:units = "days" ;
 		fates_leaf_photo_temp_acclim_timescale:long_name = "Length of the window for the exponential moving average (ema) of vegetation temperature used in photosynthesis temperature acclimation (used if fates_maintresp_leaf_model=2 or fates_leaf_photo_tempsens_model = 2)" ;
+	double fates_leaf_photo_tempsens_model ;
+		fates_leaf_photo_tempsens_model:units = "unitless" ;
+		fates_leaf_photo_tempsens_model:long_name = "switch for choosing the model that defines the temperature sensitivity of photosynthetic parameters (vcmax, jmax). 1=non-acclimating; 2=Kumarathunge et al 2019" ;
+	double fates_leaf_stomatal_assim_model ;
+		fates_leaf_stomatal_assim_model:units = "unitless" ;
+		fates_leaf_stomatal_assim_model:long_name = "a switch designating whether to use net (1) or gross (2) assimilation in the stomatal model" ;
+	double fates_leaf_stomatal_model ;
+		fates_leaf_stomatal_model:units = "unitless" ;
+		fates_leaf_stomatal_model:long_name = "switch for choosing between Ball-Berry (1) stomatal conductance model and Medlyn (2) model" ;
 	double fates_leaf_theta_cj_c3 ;
 		fates_leaf_theta_cj_c3:units = "unitless" ;
-		fates_leaf_theta_cj_c3:long_name = "SOON TO BE DEPRECATED, DO NOT USE" ;
+		fates_leaf_theta_cj_c3:long_name = "Empirical curvature parameter for ac, aj photosynthesis co-limitation in c3 plants" ;
 	double fates_leaf_theta_cj_c4 ;
 		fates_leaf_theta_cj_c4:units = "unitless" ;
-		fates_leaf_theta_cj_c4:long_name = "SOON TO BE DEPRECATED, DO NOT USE" ;
+		fates_leaf_theta_cj_c4:long_name = "Empirical curvature parameter for ac, aj photosynthesis co-limitation in c4 plants" ;
+	double fates_maintresp_leaf_model ;
+		fates_maintresp_leaf_model:units = "unitless" ;
+		fates_maintresp_leaf_model:long_name = "switch for choosing between maintenance respiration models. 1=Ryan (1991), 2=Atkin et al., (2017)" ;
 	double fates_maintresp_nonleaf_baserate ;
 		fates_maintresp_nonleaf_baserate:units = "gC/gN/s" ;
 		fates_maintresp_nonleaf_baserate:long_name = "Base maintenance respiration rate for plant tissues, using Ryan 1991" ;
 	double fates_maxcohort ;
 		fates_maxcohort:units = "count" ;
 		fates_maxcohort:long_name = "maximum number of cohorts per patch. Actual number of cohorts also depend on cohort fusion tolerances" ;
+	double fates_mort_cstarvation_model ;
+		fates_mort_cstarvation_model:units = "unitless" ;
+		fates_mort_cstarvation_model:long_name = "switch defining the carbon starvation model ( 1) Linear or 2) Exponential) in the mortality_rates function." ;
 	double fates_mort_disturb_frac ;
 		fates_mort_disturb_frac:units = "fraction" ;
 		fates_mort_disturb_frac:long_name = "fraction of canopy mortality that results in disturbance (i.e. transfer of area from new to old patch)" ;
@@ -897,6 +918,12 @@ variables:
 	double fates_q10_mr ;
 		fates_q10_mr:units = "unitless" ;
 		fates_q10_mr:long_name = "Q10 for maintenance respiration" ;
+	double fates_rad_model ;
+		fates_rad_model:units = "unitless" ;
+		fates_rad_model:long_name = "switch designating the model for canopy radiation, 1 = Norman, 2 = Two-stream (experimental)" ;
+	double fates_regeneration_model ;
+		fates_regeneration_model:units = "-" ;
+		fates_regeneration_model:long_name = "switch for choosing between FATES\'s: 1) default regeneration scheme , 2) the Tree Recruitment Scheme (Hanbury-Brown et al., 2022), or (3) the Tree Recruitment Scheme without seedling dynamics" ;
 	double fates_soil_salinity ;
 		fates_soil_salinity:units = "ppt" ;
 		fates_soil_salinity:long_name = "soil salinity used for model when not coupled to dynamic soil salinity" ;
@@ -1732,6 +1759,8 @@ data:
 
  fates_damage_event_code = 1 ;
 
+ fates_daylength_factor_switch = 1 ;
+
  fates_dev_arbitrary = _ ;
 
  fates_fire_active_crown_fire = 0 ;
@@ -1770,6 +1799,8 @@ data:
 
  fates_hydro_psicap = -0.6 ;
 
+ fates_hydro_solver = 2 ;
+
  fates_landuse_grazing_carbon_use_eff = 0 ;
 
  fates_landuse_grazing_maxheight = 1 ;
@@ -1800,14 +1831,24 @@ data:
 
  fates_leaf_photo_temp_acclim_timescale = 30 ;
 
+ fates_leaf_photo_tempsens_model = 1 ;
+
+ fates_leaf_stomatal_assim_model = 1 ;
+
+ fates_leaf_stomatal_model = 1 ;
+
  fates_leaf_theta_cj_c3 = 0.999 ;
 
  fates_leaf_theta_cj_c4 = 0.999 ;
 
+ fates_maintresp_leaf_model = 1 ;
+
  fates_maintresp_nonleaf_baserate = 2.525e-06 ;
 
  fates_maxcohort = 100 ;
 
+ fates_mort_cstarvation_model = 1 ;
+
  fates_mort_disturb_frac = 1 ;
 
  fates_mort_understorey_death = 0.55983 ;
@@ -1832,6 +1873,10 @@ data:
 
  fates_q10_mr = 1.5 ;
 
+ fates_rad_model = 1 ;
+
+ fates_regeneration_model = 1 ;
+
  fates_soil_salinity = 0.4 ;
 
  fates_trs_seedling2sap_par_timescale = 32 ;

parameter_files/fates_params_default.cdl

@@ -1,4 +1,4 @@
-netcdf tmp {
+netcdf fates_params_default {
 dimensions:
 	fates_NCWD = 4 ;
 	fates_history_age_bins = 7 ;