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Update lab_linux_intro.qmd
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dahlo authored Nov 8, 2023
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Expand Up @@ -132,7 +132,7 @@ Now you will need some files. To avoid all the course participants editing the s

The files are located in the folder **/sw/courses/ngsintro/linux/linux_tutorial**

or they can be downloaded if you are not on UPPMAX at the moment, [files.tar.gz](https://github.com/NBISweden/workshop-ngsintro/blob/main/topics/linux/assets/files.tar.gz) (instruction on how to download further down)
or they can be downloaded if you are not on UPPMAX at the moment, [files.tar.gz](assets/files.tar.gz) (instruction on how to download further down)

For structures sake, first create a folder with your username in the **nobackup** folder, and a folder called **linux_tutorial** inside that folder, where you can put all your lab files.

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{{< fa lightbulb >}} Remember to tab-complete to avoid typos and too much writing.

If you are unable to copy the files on UPPMAX, you can [download the files from this link](data/linux/files.tar.gz) instead of copying them. This is done with the command `wget` (*web get*). It works kind of the same way as the `cp` command, but you give it a source URL instead of a source file, and you specify the destination by giving it a prefix, a path that will be appended in front on the file name when it's downloaded.
If you are unable to copy the files on UPPMAX, you can [download the files from this link](assets/files.tar.gz) instead of copying them. This is done with the command `wget` (*web get*). It works kind of the same way as the `cp` command, but you give it a source URL instead of a source file, and you specify the destination by giving it a prefix, a path that will be appended in front on the file name when it's downloaded.

*i.e*; if you want to download the file http://somewhere.com/my.file and you give it the prefix `~/analysis/`, the downloaded file will be saved as `~/analysis/my.file`.

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