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EmiliaJarochowska committed Nov 6, 2024
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6 changes: 1 addition & 5 deletions index.qmd
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Expand Up @@ -12,15 +12,11 @@ This project is a consortium between [Utrecht University](https://www.uu.nl/en/r

### Project news

- Check our [workshop page](https://mindthegap-erc.github.io/subpages/workshops.html) for descriptions of the workshops we offer
- The [Paleoverse lecture](https://palaeoverse.org/lectures) *"Building modeling pipelines for stratigraphic paleobiology in R"* by Niklas Hohmann can now be [viewed on YouTube](https://www.youtube.com/watch?v=1H-xnD82fzA), all materials are available on [Zenodo](https://doi.org/10.5281/zenodo.14001502)

- [Nonparametric estimation of age-depth models from sedimentological and stratigraphic information](https://doi.org/10.5194/egusphere-2024-2857) is now posted as a preprint for public discussion and peer review. We welcome your comments!

- We held the first workshop "Building modeling pipelines for stratigraphic paleobiology in R". The materials are [freely available online](https://zenodo.org/records/13769443)

- Niklas Hohmann received the [PeerJ prize for the best talk](https://peerj.com/blog/post/115284889715/peerj-awards-at-palges-2024/) at the Annual Meeting of the *Paläontologische Gesellschaft*

- The `StratPal` package ([Github](https://github.com/MindTheGap-ERC/StratPal) \| [Website](https://mindthegap-erc.github.io/StratPal/)) is now available on [CRAN](https://cran.r-project.org/package=StratPal)


*Funded by the European Union (ERC, MindTheGap, StG project no 101041077). Views and opinions expressed are however those of the author(s) only and do not necessarily reflect those of the European Union or the European Research Council. Neither the European Union nor the granting authority can be held responsible for them.*
2 changes: 2 additions & 0 deletions subpages/workshops.qmd
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Contact: [Niklas Hohmann](mailto:[email protected]) and [Emilia Jarochowska](mailto:[email protected])

![Example workflow of a model in stratigraphic paleobiology: The sedimentological forward model specifies what facies is deposited where, and how long the gaps are (left). This information is combined with models of biological change specifies what part of the evolutionary history are preserved (bottom right), and the patterns we can observe in the stratigraphic record (top right). Here , the gaps produce artefactual jumps in trait evoltution.](/img/stratpal_workflow_example.png)

## Modeling Carbonate Platform growth using CarboKitten.jl

Stratigraphic forward models permit us to test hypotheses on the structure of the geological record and on the preservation of proxies or biological information. Until now, most stratigraphic forward models focused on marine siliciclastic or terrestrial environments. However, carbonate platforms have entirely different dynamics, as the sediment is "born, not made" and produced mostly *in situ*. Carbonate platforms are also biodiversity hotspots. In this workshop, we present the first Open Source 3D forward model of carbonate platform growth using [`CarboKitten.jl`](https://mindthegap-erc.github.io/CarboKitten.jl/), written in a new language [Julia](https://julialang.org/), developed specifically for high-performance scientific applications.
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