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Merge pull request #82 from MesquiteProject/development
3.51 development into master
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103 changes: 103 additions & 0 deletions
103
Source/mesquite/dmanager/RemoveTaxonPrefixSuffix/RemoveTaxonPrefixSuffix.java
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| /* Mesquite source code. Copyright 1997 and onward, W. Maddison and D. Maddison. | ||
| Disclaimer: The Mesquite source code is lengthy and we are few. There are no doubt inefficiencies and goofs in this code. | ||
| The commenting leaves much to be desired. Please approach this source code with the spirit of helping out. | ||
| Perhaps with your help we can be more than a few, and make Mesquite better. | ||
| Mesquite is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY. | ||
| Mesquite's web site is http://mesquiteproject.org | ||
| This source code and its compiled class files are free and modifiable under the terms of | ||
| GNU Lesser General Public License. (http://www.gnu.org/copyleft/lesser.html) | ||
| */ | ||
| package mesquite.dmanager.RemoveTaxonPrefixSuffix; | ||
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| import java.util.*; | ||
| import java.awt.*; | ||
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| import mesquite.lib.*; | ||
| import mesquite.lib.duties.*; | ||
| import mesquite.lib.table.*; | ||
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| public class RemoveTaxonPrefixSuffix extends TaxonNameAlterer { | ||
| String searchText="."; | ||
| MesquiteBoolean suffix = new MesquiteBoolean(true); | ||
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| /*.................................................................................................................*/ | ||
| public boolean startJob(String arguments, Object condition, boolean hiredByName){ | ||
| return true; | ||
| } | ||
| /*.................................................................................................................*/ | ||
| public int getVersionOfFirstRelease(){ | ||
| return 351; | ||
| } | ||
| /*.................................................................................................................*/ | ||
| public boolean getOptions(Taxa taxa, int firstSelected){ | ||
| if (MesquiteThread.isScripting()) | ||
| return true; | ||
| MesquiteInteger buttonPressed = new MesquiteInteger(1); | ||
| ExtensibleDialog queryDialog = new ExtensibleDialog(containerOfModule(), "Remove Prefix or Suffix", buttonPressed); | ||
| queryDialog.addLabel("Remove the prefix or suffix of taxon name", Label.CENTER); | ||
| SingleLineTextField searchField = queryDialog.addTextField("Delimiter:", searchText, 12, true); | ||
| Checkbox suffixBox = queryDialog.addCheckBox("Remove Suffix (otherwise Prefix)", suffix.getValue()); | ||
| queryDialog.completeAndShowDialog(true); | ||
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| boolean ok = (queryDialog.query()==0); | ||
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| if (ok) { | ||
| searchText = searchField.getText(); | ||
| suffix.setValue(suffixBox.getState()); | ||
| } | ||
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| queryDialog.dispose(); | ||
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| return ok; | ||
| } | ||
| /*.................................................................................................................*/ | ||
| /** Called to alter the taxon name in a single cell. If you use the alterContentOfCells method of this class, | ||
| then you must supply a real method for this, not just this stub. */ | ||
| public boolean alterName(Taxa taxa, int it){ | ||
| boolean nameChanged = false; | ||
| String name = taxa.getTaxonName(it); | ||
| if (name!=null){ | ||
| String s = ""; | ||
| if (suffix.getValue()){ //removing suffix | ||
| int delim = name.lastIndexOf(searchText); | ||
| if (delim>=0){ | ||
| name = name.substring(0, delim); | ||
| taxa.setTaxonName(it, name, false); | ||
| nameChanged = true; | ||
| } | ||
| } | ||
| else { | ||
| int delim = name.indexOf(searchText); | ||
| if (delim>=0){ | ||
| name = name.substring(delim+1, name.length()); | ||
| taxa.setTaxonName(it, name, false); | ||
| nameChanged = true; | ||
| } | ||
| } | ||
| } | ||
| return nameChanged; | ||
| } | ||
| /*.................................................................................................................*/ | ||
| public String getNameForMenuItem() { | ||
| return "Remove Prefix/Suffix of Taxon Name..."; | ||
| } | ||
| /*.................................................................................................................*/ | ||
| public String getName() { | ||
| return "Remove Prefix/Suffix of Taxon Name"; | ||
| } | ||
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| /*.................................................................................................................*/ | ||
| public String getExplanation() { | ||
| return "Remove Prefix or Suffix of Taxon Name."; | ||
| } | ||
| } | ||
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