moved operator related stuff into subdir operator

Makefile.in

@@ -40,26 +40,26 @@ LINKLIBS = ${top_builddir}/linalg/liblinalg.a  \
 
 COMPILE = ${CC} ${DEFS} ${INCLUDES} -o $@ ${CFLAGS}
 
-SMODULES = Hopping_Matrix_nocom tm_times_Hopping_Matrix Hopping_Matrix tm_operators tm_sub_Hopping_Matrix
+SMODULES = 
 
 MODULES = read_input gamma hybrid_update measure_gauge_action start \
 	expo get_staples update_backward_gauge \
 	measure_rectangles get_rectangle_staples  \
 	test/check_geometry test/check_xchange \
-	test/overlaptests clovertm_operators clover_leaf \
+	test/overlaptests \
 	invert_eo invert_doublet_eo update_gauge \
 	polyakov_loop getopt sighandler reweighting_factor \
 	source_generation boundary update_tm ranlxd  \
 	mpi_init deriv_Sb deriv_Sb_D_psi ranlxs \
 	geometry_eo invert_overlap \
 	init_moment_field init_gauge_tmp prepare_source \
 	init_gauge_field init_geometry_indices init_spinor_field \
-	init_dirac_halfspinor tm_operators_nd \
+	init_dirac_halfspinor \
 	chebyshev_polynomial_nd Ptilde_nd  \
 	init_chi_spinor_field reweighting_factor_nd \
-	init_bispinor_field D_psi \
+	init_bispinor_field \
 	online_measurement update_momenta integrator  phmc \
-	little_D block Dov_psi operator measurements pion_norm Dov_proj \
+	little_D block operator measurements pion_norm \
 	temporalgauge spinor_fft X_psi P_M_eta \
 	jacobi init_jacobi_field \
 	fatal_error invert_clover_eo gettime @SPI_FILES@ init_omp_accumulators

Ptilde_nd.c

@@ -30,8 +30,8 @@
 #include "global.h"
 #include "linalg_eo.h"
 #include "start.h"
-#include "tm_operators.h"
-#include "tm_operators_nd.h"
+#include "operator/tm_operators.h"
+#include "operator/tm_operators_nd.h"
 #include "chebyshev_polynomial_nd.h"
 #include "phmc.h"
 #include "solver/matrix_mult_typedef_nd.h"

X_psi.c

@@ -29,10 +29,10 @@
 #include "global.h"
 #include "su3.h"
 #include "linalg_eo.h"
-#include "D_psi.h"
+#include "operator/D_psi.h"
 #include "gamma.h"
 #include "X_psi.h"
-#include "tm_operators.h"
+#include "operator/tm_operators.h"
 #include "solver/solver.h"
 #include "read_input.h"
 

benchmark.c

@@ -54,9 +54,9 @@
 #include "read_input.h"
 #include "start.h"
 #include "boundary.h"
-#include "Hopping_Matrix.h"
-#include "Hopping_Matrix_nocom.h"
-#include "tm_operators.h"
+#include "operator/Hopping_Matrix.h"
+#include "operator/Hopping_Matrix_nocom.h"
+#include "operator/tm_operators.h"
 #include "global.h"
 #include "xchange/xchange.h"
 #include "init_gauge_field.h"
@@ -65,7 +65,7 @@
 #include "init_moment_field.h"
 #include "init_dirac_halfspinor.h"
 #include "test/check_geometry.h"
-#include "D_psi.h"
+#include "operator/D_psi.h"
 #include "phmc.h"
 #include "mpi_init.h"
 

block.c

@@ -28,7 +28,7 @@
 #include <stdlib.h>
 #include <string.h>
 #include "global.h"
-#include "D_psi.h"
+#include "operator/D_psi.h"
 #include "linalg_eo.h"
 #include "start.h"
 #include "xchange/xchange.h"

chebyshev_polynomial.c

@@ -28,8 +28,8 @@
 #include "global.h"
 #include "linalg_eo.h"
 #include "start.h"
-#include "tm_operators.h"
-#include "tm_operators_nd.h"
+#include "operator/tm_operators.h"
+#include "operator/tm_operators_nd.h"
 #include "chebyshev_polynomial.h"
 
 #define PI 3.141592653589793

chebyshev_polynomial_nd.c

@@ -27,8 +27,8 @@
 #include "global.h"
 #include "linalg_eo.h"
 #include "start.h"
-#include "tm_operators.h"
-#include "tm_operators_nd.h"
+#include "operator/tm_operators.h"
+#include "operator/tm_operators_nd.h"
 #include "phmc.h"
 #include "Ptilde_nd.h"
 #include "chebyshev_polynomial_nd.h"

check_locallity.c

@@ -62,7 +62,7 @@
 #include "smearing/stout.h"
 #include "su3spinor.h"
 #include "invert_eo.h"
-#include "D_psi.h"
+#include "operator/D_psi.h"
 #include "linalg/convert_eo_to_lexic.h"
 
 

configure.in

@@ -40,7 +40,7 @@ AC_CHECK_PROG(CCDEP, gcc, "gcc", "$CC")
 LDFLAGS="$LDFLAGS -L\${HOME}/lib -L\${top_builddir}/lib"
 CCLD=${CC}
 
-USESUBDIRS="buffers cu io solver linalg monomial xchange"
+USESUBDIRS="buffers cu io solver linalg monomial xchange operator"
 
 AC_CHECK_HEADERS([stdint.h],
 [ dnl for inttypes.h and stdint.h for uint_xxx types
@@ -897,7 +897,7 @@ if test ! -e tests/regressions; then
 fi
 
 
-LIBS="-lhmc -lmonomial -lsolver -lxchange -llinalg -lhmc -lio $LIBS"
+LIBS="-lhmc -lmonomial -loperator -lsolver -lxchange -llinalg -lhmc -lio $LIBS"
 AUTOCONF=autoconf
 
 for i in $USESUBDIRS

hopping_test.c

@@ -52,9 +52,9 @@
 #include "read_input.h"
 #include "start.h"
 #include "boundary.h"
-#include "Hopping_Matrix.h"
-#include "Hopping_Matrix_nocom.h"
-#include "tm_operators.h"
+#include "operator/Hopping_Matrix.h"
+#include "operator/Hopping_Matrix_nocom.h"
+#include "operator/tm_operators.h"
 #include "global.h"
 #include "xchange/xchange.h"
 #include "init_gauge_field.h"
@@ -63,8 +63,7 @@
 #include "init_moment_field.h"
 #include "init_dirac_halfspinor.h"
 #include "test/check_geometry.h"
-#include "xchange_halffield.h"
-#include "D_psi.h"
+#include "operator/D_psi.h"
 #include "phmc.h"
 #include "mpi_init.h"
 #include "io/io_cm.h"

invert.c

@@ -72,7 +72,7 @@
 #include "monomial/monomial.h"
 #include "ranlxd.h"
 #include "phmc.h"
-#include "D_psi.h"
+#include "operator/D_psi.h"
 #include "little_D.h"
 #include "reweighting_factor.h"
 #include "linalg/convert_eo_to_lexic.h"
@@ -88,8 +88,8 @@
 #include <io/utils.h>
 #include "solver/dirac_operator_eigenvectors.h"
 #include "P_M_eta.h"
-#include "tm_operators.h"
-#include "Dov_psi.h"
+#include "operator/tm_operators.h"
+#include "operator/Dov_psi.h"
 #include "solver/spectral_proj.h"
 void usage()
 {

invert_clover_eo.c

@@ -38,10 +38,10 @@
 #include"global.h"
 #include"su3.h"
 #include"linalg_eo.h"
-#include"tm_operators.h"
-#include"Hopping_Matrix.h"
-#include"clovertm_operators.h"
-#include"D_psi.h"
+#include"operator/tm_operators.h"
+#include"operator/Hopping_Matrix.h"
+#include"operator/clovertm_operators.h"
+#include"operator/D_psi.h"
 #include"gamma.h"
 #include"solver/solver.h"
 #include"invert_clover_eo.h"

invert_doublet_eo.c

@@ -37,14 +37,14 @@
 #include<stdlib.h>
 #include"global.h"
 #include"linalg_eo.h"
-#include"tm_operators.h"
-#include"Hopping_Matrix.h"
-#include"D_psi.h"
+#include"operator/tm_operators.h"
+#include"operator/Hopping_Matrix.h"
+#include"operator/D_psi.h"
 #include"gamma.h"
 #include"solver/solver.h"
 #include"read_input.h"
 #include"xchange/xchange.h"
-#include"tm_operators_nd.h"
+#include"operator/tm_operators_nd.h"
 #include"invert_doublet_eo.h"
 
 

invert_eo.c

@@ -37,9 +37,9 @@
 #include<stdlib.h>
 #include"global.h"
 #include"linalg_eo.h"
-#include"tm_operators.h"
-#include"Hopping_Matrix.h"
-#include"D_psi.h"
+#include"operator/tm_operators.h"
+#include"operator/Hopping_Matrix.h"
+#include"operator/D_psi.h"
 #include"gamma.h"
 #include"solver/solver.h"
 #include"read_input.h"

invert_overlap.c

@@ -27,10 +27,10 @@
 #include "solver/cgs_real.h"
 #include "operator.h"
 #include "invert_overlap.h"
-#include "Dov_psi.h"
+#include "operator/Dov_psi.h"
 #include "linalg_eo.h"
 #include "read_input.h"
-#include "tm_operators.h"
+#include "operator/tm_operators.h"
 #include "gamma.h"
 #include "solver/cg_her.h"
 

monomial/clover_trlog_monomial.c

@@ -29,10 +29,10 @@
 #include "su3.h"
 #include "su3adj.h"
 #include "su3spinor.h"
-#include "clovertm_operators.h"
-#include "clover_leaf.h"
+#include "operator/clovertm_operators.h"
+#include "operator/clover_leaf.h"
 #include "monomial/monomial.h"
-#include "Hopping_Matrix.h"
+#include "operator/Hopping_Matrix.h"
 #include "clover_trlog_monomial.h"
 
 void clover_trlog_derivative(const int id, hamiltonian_field_t * const hf) {

monomial/cloverdet_monomial.c

@@ -34,16 +34,16 @@
 #include "linalg_eo.h"
 #include "deriv_Sb.h"
 #include "gamma.h"
-#include "tm_operators.h"
-#include "Hopping_Matrix.h"
+#include "operator/tm_operators.h"
+#include "operator/Hopping_Matrix.h"
 #include "solver/chrono_guess.h"
 #include "solver/solver.h"
-#include "clover_leaf.h"
+#include "operator/clover_leaf.h"
 #include "read_input.h"
 #include "hamiltonian_field.h"
 #include "boundary.h"
 #include "monomial/monomial.h"
-#include "clovertm_operators.h"
+#include "operator/clovertm_operators.h"
 #include "cloverdet_monomial.h"
 
 /* think about chronological solver ! */

monomial/cloverdetratio_monomial.c

@@ -32,13 +32,13 @@
 #include "linalg_eo.h"
 #include "deriv_Sb.h"
 #include "gamma.h"
-#include "tm_operators.h"
-#include "Hopping_Matrix.h"
+#include "operator/tm_operators.h"
+#include "operator/Hopping_Matrix.h"
 #include "solver/chrono_guess.h"
 #include "solver/solver.h"
 #include "read_input.h"
-#include "clovertm_operators.h"
-#include "clover_leaf.h"
+#include "operator/clovertm_operators.h"
+#include "operator/clover_leaf.h"
 #include "monomial/monomial.h"
 #include "boundary.h"
 #include "cloverdetratio_monomial.h"

monomial/clovernd_trlog_monomial.c

@@ -29,10 +29,10 @@
 #include "su3.h"
 #include "su3adj.h"
 #include "su3spinor.h"
-#include "clovertm_operators.h"
-#include "clover_leaf.h"
+#include "operator/clovertm_operators.h"
+#include "operator/clover_leaf.h"
 #include "monomial/monomial.h"
-#include "Hopping_Matrix.h"
+#include "operator/Hopping_Matrix.h"
 #include "clovernd_trlog_monomial.h"
 
 void clovernd_trlog_derivative(const int id, hamiltonian_field_t * const hf) {

monomial/cloverndpoly_monomial.c

@@ -31,16 +31,16 @@
 #include "start.h"
 #include "solver/solver.h"
 #include "deriv_Sb.h"
-#include "tm_operators.h"
-#include "tm_operators_nd.h"
-#include "Hopping_Matrix.h"
+#include "operator/tm_operators.h"
+#include "operator/tm_operators_nd.h"
+#include "operator/Hopping_Matrix.h"
 #include "phmc.h"
 #include "Ptilde_nd.h"
 #include "monomial/monomial.h"
 #include "hamiltonian_field.h"
 #include "boundary.h"
-#include "clovertm_operators.h"
-#include "clover_leaf.h"
+#include "operator/clovertm_operators.h"
+#include "operator/clover_leaf.h"
 #include "cloverndpoly_monomial.h"
 
 /********************************************

monomial/det_monomial.c

@@ -30,9 +30,9 @@
 #include "linalg_eo.h"
 #include "deriv_Sb.h"
 #include "deriv_Sb_D_psi.h"
-#include "tm_operators.h"
+#include "operator/tm_operators.h"
 #include "hybrid_update.h"
-#include "Hopping_Matrix.h"
+#include "operator/Hopping_Matrix.h"
 #include "solver/chrono_guess.h"
 #include "solver/solver.h"
 #include "read_input.h"

monomial/detratio_monomial.c

@@ -31,8 +31,8 @@
 #include "linalg_eo.h"
 #include "deriv_Sb.h"
 #include "deriv_Sb_D_psi.h"
-#include "tm_operators.h"
-#include "Hopping_Matrix.h"
+#include "operator/tm_operators.h"
+#include "operator/Hopping_Matrix.h"
 #include "solver/chrono_guess.h"
 #include "solver/solver.h"
 #include "read_input.h"

monomial/monomial.c

@@ -31,9 +31,9 @@
 #include "su3.h"
 #include "su3adj.h"
 #include "su3spinor.h"
-#include "tm_operators.h"
-#include "clovertm_operators.h"
-#include "clover_leaf.h"
+#include "operator/tm_operators.h"
+#include "operator/clovertm_operators.h"
+#include "operator/clover_leaf.h"
 #include "ranlxd.h"
 #include "sse.h"
 #include "linalg_eo.h"

monomial/nddetratio_monomial.c

@@ -32,14 +32,14 @@
 #include "start.h"
 #include "solver/solver.h"
 #include "deriv_Sb.h"
-#include "tm_operators.h"
+#include "operator/tm_operators.h"
 #include "chebyshev_polynomial.h"
-#include "tm_operators_nd.h"
-#include "Hopping_Matrix.h"
+#include "operator/tm_operators_nd.h"
+#include "operator/Hopping_Matrix.h"
 #include "phmc.h"
 #include "boundary.h"
 #include "gamma.h"
-#include "tm_operators_nd.h"
+#include "operator/tm_operators_nd.h"
 #include "chebyshev_polynomial_nd.h"
 #include "Ptilde_nd.h"
 #include "reweighting_factor_nd.h"