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Download NifTI headers from remote host #2979

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merged 4 commits into from
Aug 30, 2024
Merged

Download NifTI headers from remote host #2979

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02c8a76
Fetch NIfTI headers from remote host
daljit46 Aug 29, 2024
b17370c
Remove NIfTI headers from codebase
MRtrixBot Aug 29, 2024
c7638ab
CMake: Add NIfTI headers to documentation list of external dependencies
Lestropie Aug 30, 2024
78c8e4a
Remove duplicate line
daljit46 Aug 30, 2024
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9 changes: 5 additions & 4 deletions CMakeLists.txt
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Original file line number Diff line number Diff line change
Expand Up @@ -26,10 +26,11 @@ option(MRTRIX_PYTHON_SOFTLINK "Build directory softlink to Python source code ra
option(MRTRIX_BUILD_NON_CORE_STATIC "Build MRtrix's non-core code as a static library" OFF)

set(MRTRIX_DEPENDENCIES_DIR "" CACHE PATH
"An optional local directory containing thirdparty dependencies:\n \
- Eigen3 https://gitlab.com/libeigen/eigen\n \
- Json for Modern C++ https://github.com/nlohmann/json\n \
- Half https://half.sourceforge.net/\n"
"An optional local directory containing all thirdparty dependencies:\n \
- Eigen3 https://gitlab.com/libeigen/eigen (version 3.4.0 in .tar.gz format)\n \
- Json for Modern C++ https://github.com/nlohmann/json (version 3.11.3 in .tar.xz format)\n \
- Half https://half.sourceforge.net/ (version 2.1.0 in zip format)\n \
- NIfTI C headers https://nifti.nimh.nih.gov/pub/dist/src/nifti2/ (nifti1.h and nifti2.h stored in nifti/ subdirectory)\n"
)

if(MRTRIX_BUILD_TESTS)
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25 changes: 24 additions & 1 deletion cmake/Dependencies.cmake
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Expand Up @@ -64,4 +64,27 @@ target_include_directories(half INTERFACE "${half_SOURCE_DIR}/include")
# Nifti headers
add_library(nifti INTERFACE)
add_library(nifti::nifti ALIAS nifti)
target_include_directories(nifti INTERFACE "${PROJECT_SOURCE_DIR}/thirdparty/nifti")

if(MRTRIX_LOCAL_DEPENDENCIES)
target_include_directories(nifti INTERFACE "${MRTRIX_DEPENDENCIES_DIR}/nifti")
else()
include(ExternalProject)
ExternalProject_Add(
nifti1
PREFIX nifti
URL "https://nifti.nimh.nih.gov/pub/dist/src/nifti2/nifti1.h"
CONFIGURE_COMMAND "" BUILD_COMMAND "" INSTALL_COMMAND ""
DOWNLOAD_NO_EXTRACT ON
DOWNLOAD_NO_PROGRESS ON
)
ExternalProject_Add(
nifti2
PREFIX nifti
URL "https://nifti.nimh.nih.gov/pub/dist/src/nifti2/nifti2.h"
CONFIGURE_COMMAND "" BUILD_COMMAND "" INSTALL_COMMAND ""
DOWNLOAD_NO_EXTRACT ON
DOWNLOAD_NO_PROGRESS ON
)
target_include_directories(nifti INTERFACE "${CMAKE_CURRENT_BINARY_DIR}/nifti/src/")
endif()

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