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Add support for testing Python scripts
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,58 @@ | ||
| # A function that adds a bash test for each line in a given file | ||
| function(add_bash_tests) | ||
| set(singleValueArgs FILE_PATH PREFIX WORKING_DIRECTORY) | ||
| set(multiValueArgs EXEC_DIRECTORIES) | ||
| cmake_parse_arguments( | ||
| ARG | ||
| "" | ||
| "${singleValueArgs}" | ||
| "${multiValueArgs}" | ||
| ${ARGN} | ||
| ) | ||
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| set(file_path ${ARG_FILE_PATH}) | ||
| set(prefix ${ARG_PREFIX}) | ||
| set(working_directory ${ARG_WORKING_DIRECTORY}) | ||
| set(exec_directories ${ARG_EXEC_DIRECTORIES}) | ||
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| get_filename_component(file_name ${file_path} NAME_WE) | ||
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| # Add a custom target for IDEs to pickup the test script | ||
| add_custom_target(test_${file_name} SOURCES ${file_path}) | ||
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| # Add test that cleans up temporary files | ||
| add_test( | ||
| NAME ${prefix}_${file_name}_cleanup | ||
| COMMAND ${BASH} -c "rm -rf ${DATA_DIR}/tmp* ${DATA_DIR}/*-tmp-*" | ||
| WORKING_DIRECTORY ${DATA_DIR} | ||
| ) | ||
| set_tests_properties(${prefix}_${file_name}_cleanup PROPERTIES FIXTURES_SETUP ${file_name}_cleanup) | ||
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| file(STRINGS ${file_path} FILE_CONTENTS) | ||
| list(LENGTH FILE_CONTENTS FILE_CONTENTS_LENGTH) | ||
| math(EXPR MAX_LINE_NUM "${FILE_CONTENTS_LENGTH} - 1") | ||
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| set(EXEC_DIR_PATHS "${exec_directories}") | ||
| string(REPLACE ";" ":" EXEC_DIR_PATHS "${EXEC_DIR_PATHS}") | ||
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| foreach(line_num RANGE ${MAX_LINE_NUM}) | ||
| list(GET FILE_CONTENTS ${line_num} line) | ||
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| set(test_name ${file_name}) | ||
| if(${FILE_CONTENTS_LENGTH} GREATER 1) | ||
| math(EXPR suffix "${line_num} + 1") | ||
| set(test_name "${file_name}_${suffix}") | ||
| endif() | ||
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| add_test( | ||
| NAME ${prefix}_${test_name} | ||
| COMMAND ${BASH} -c "export PATH=${EXEC_DIR_PATHS}:$PATH;${line}" | ||
| WORKING_DIRECTORY ${working_directory} | ||
| ) | ||
| set_tests_properties(${prefix}_${test_name} | ||
| PROPERTIES FIXTURES_REQUIRED ${file_name}_cleanup | ||
| ) | ||
| message(VERBOSE "Add bash tests commands for ${file_name}: ${line}") | ||
| endforeach() | ||
| endfunction() |
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -1,4 +1,5 @@ | ||
| add_subdirectory(binaries) | ||
| add_subdirectory(lib) | ||
| add_subdirectory(scripts) | ||
| add_subdirectory(tools) | ||
| add_subdirectory(unit_tests) |
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,31 @@ | ||
| find_program(BASH bash) | ||
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| set(DATA_DIR ${CMAKE_CURRENT_SOURCE_DIR}/data) | ||
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| include(BashTests) | ||
| function(add_bash_script_tests file_path) | ||
| set(EXEC_DIRS ${CMAKE_CURRENT_BINARY_DIR}) | ||
| list(APPEND EXEC_DIRS ${PROJECT_BINARY_DIR}/bin) | ||
| list(APPEND EXEC_DIRS ${PROJECT_BINARY_DIR}/testing/tools) | ||
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| add_bash_tests( | ||
| FILE_PATH "${file_path}" | ||
| PREFIX "script" | ||
| WORKING_DIRECTORY ${DATA_DIR} | ||
| EXEC_DIRECTORIES "${EXEC_DIRS}" | ||
| ) | ||
| endfunction() | ||
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| add_bash_script_tests(${CMAKE_CURRENT_SOURCE_DIR}/tests/5ttgen) | ||
| add_bash_script_tests(${CMAKE_CURRENT_SOURCE_DIR}/tests/dwi2mask) | ||
| add_bash_script_tests(${CMAKE_CURRENT_SOURCE_DIR}/tests/dwi2response) | ||
| add_bash_script_tests(${CMAKE_CURRENT_SOURCE_DIR}/tests/dwibiascorrect) | ||
| add_bash_script_tests(${CMAKE_CURRENT_SOURCE_DIR}/tests/dwicat) | ||
| add_bash_script_tests(${CMAKE_CURRENT_SOURCE_DIR}/tests/dwifslpreproc) | ||
| add_bash_script_tests(${CMAKE_CURRENT_SOURCE_DIR}/tests/dwigradcheck) | ||
| add_bash_script_tests(${CMAKE_CURRENT_SOURCE_DIR}/tests/dwinormalise) | ||
| add_bash_script_tests(${CMAKE_CURRENT_SOURCE_DIR}/tests/dwishellmath) | ||
| add_bash_script_tests(${CMAKE_CURRENT_SOURCE_DIR}/tests/for_each) | ||
| add_bash_script_tests(${CMAKE_CURRENT_SOURCE_DIR}/tests/labelsgmfix) | ||
| add_bash_script_tests(${CMAKE_CURRENT_SOURCE_DIR}/tests/population_template) | ||
| add_bash_script_tests(${CMAKE_CURRENT_SOURCE_DIR}/tests/responsemean) |