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@TCLamnidis TCLamnidis released this 19 Sep 12:05
· 140 commits to main since this release
1.0.0
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Learn about vigilant mode.

[1.0.0] - 19/09/2022

Added

  • Directory structure now includes a subdirectory with the site ID.
  • Jobs are now submitted to all.q

Fixed

  • Fixed a bug where the bams of additional Autorun pipelines would be pulled for processing than intended.
  • The sample names for single stranded libraries now include the suffix _ss in the Sample Name field. Avoids file name collisions and makes merging of genotypes easier and allows end users to pick between dsDNA and ssDNA genotypes for individuals where both are available.
  • Library names of single stranded libraries also include the suffix _ss in the Library Name field. This ensures that rows in the MultiQC report are sorted correctly.

Dependencies

  • nf-core/eager=2.4.5

Deprecated

Contributors

Contributors

jfy133 and TCLamnidis
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