0.2.3

Added numpy<2 dependency as version upgrade of NumPy to major version 2 breaks required scanpy version.

See the release notes for more information.

This release is available via PyPi:

pip install nichecompass

Please report any issues on GitHub.

0.2.2

• Synced repository with Zenodo to mint DOI for publication.

See the release notes for more information.

This release is not available on PyPi (the code is identical to release 0.2.1).

0.2.1

• Added a user guide to the package documentation.

See the release notes for more information.

This release is available via PyPi:

pip install nichecompass

Please report any issues on GitHub.

0.2.0

• Fixed bugs related to random seeds and prior gene programs.
• Updated hyperparameters based on ablation experiments.

See the release notes for more information.

This release is available via PyPi:

pip install nichecompass

Please report any issues on GitHub.

0.1.3

What's Changed

• Status badges by @ArianAmani in #60
• Change data type of latent representation to improve scaling by @sebastianbirk in #61
• Tutorials review by @ArianAmani in #62
• move scglue to optional dependency by @adamrboxall in #68

New Contributors

• @ArianAmani made their first contribution in #60

Full Changelog: 0.1.2...0.1.3

0.1.2

Fixing further package upload requirements.

See the release notes for more information.

This release is available via PyPi:

pip install nichecompass

Please report any issues on GitHub.

0.1.1

Fixing package upload requirements after the first release of NicheCompass.

See the release notes for more information.

This release is available via PyPi:

pip install nichecompass

Please report any issues on GitHub.

0.1.0

The first release of NicheCompass.

See the release notes for more information.

This release is available via PyPi:

pip install nichecompass

Please report any issues on GitHub.