No longer check for the existance of the local BigWig files since we …

…are no longer downloading them
LieberInstitute · May 21, 2024 · ef265c4 · ef265c4
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commit ef265c4
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diff --git a/vignettes/recount-workflow.Rmd b/vignettes/recount-workflow.Rmd
@@ -875,7 +875,6 @@ names(bws) <- colData(rse_er_scaled)$run
 ## Workaround to https://github.com/lawremi/rtracklayer/issues/83: use the local
 ## files we already downloaded
 bws <- gsub("http://duffel.rail.bio/recount/", "", bws)
-stopifnot(all(file.exists(bws)))
 ```
 
 We visualize the DERs using `derfinderPlot`, similar to what was done in the original publication [@jaffe2015]. However, we first add a little padding to the regions: 100 base-pairs on each side.