BioGraphia

You can try BioGraphia on link. We disabled login for the demo version.

Configuration

Create a .env file in the root directory and set the following variables:

OPENAI_API_KEY= [YOUR_API_KEY_HERE]
OPENAI_ANALYSIS_MODEL=o1
OPENAI_JSON_MODEL=gpt-4o

VITE_SERVER_HOST=localhost
VITE_BACKEND_PORT=3000 # Backend Port
VITE_FRONTEND_PORT=9000 # Frontend Port

Installation

1. Clone the repository:

   git clone [repository-url]
   cd BioGraphia
   

2. Install Python dependencies:

   pip install -r requirements.txt
   

3. Install frontend dependencies:

   npm install
   

Running the Application

the application can be started with a single command:

python start.py

Run the application in standalone mode:

python start.py --standalone

this will restore the data every 5 minutes

Creating a zrok tunnel

To create your own zrok tunnel, use the following commands:

1. Create a zrok account to get your account token.
2. Download zrok through this link.
3. Enable zrok for your account.

zrok enable <your_account_token>

4. Reserve a public share token named <unique_name>

zrok reserve public <your_local_frontend_url> --unique-name <unique_name>

5. Share the reserved token

zrok share reserved <unique_name>

6. Now you should be able to visit the site using <unique_name>.share.zrok.io.

This project is licensed under the Apache 2.0 License.