Some knowl improvements #3365
Workflow file for this run
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| name: Tests | |
| on: | |
| push: | |
| branches: [ '**' ] | |
| pull_request: | |
| branches: [ main, dev, web ] | |
| jobs: | |
| matrix_prep: | |
| name: Initial setup | |
| runs-on: ubuntu-latest | |
| outputs: | |
| matrix: ${{ steps.set-matrix.outputs.matrix }} | |
| steps: | |
| # Required as the JSON input file needs to be read | |
| - uses: actions/checkout@v3 | |
| - name: Conditional Build Matrix | |
| id: set-matrix | |
| uses: JoshuaTheMiller/conditional-build-matrix@main | |
| with: | |
| # Filtering the default input file: '.github/workflows/matrix_includes.json' | |
| # using JMESPath https://jmespath.org/examples.html | |
| filter: "[? '${{ secrets.LMFDB_CI_ACCESS }}' || server == 'devmirror']" | |
| test: | |
| runs-on: ubuntu-latest | |
| needs: matrix_prep | |
| strategy: | |
| fail-fast: false | |
| matrix: ${{fromJson(needs.matrix_prep.outputs.matrix)}} | |
| name: ${{matrix.server}} ${{matrix.folders}} | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - uses: conda-incubator/setup-miniconda@v2 | |
| with: | |
| activate-environment: lmfdb | |
| auto-activate-base: false | |
| # environment-file: .environment.yml # now we install after cache | |
| channel-priority: strict | |
| # IMPORTANT: use-only-tar-bz2: true needs to be set for caching to work properly! | |
| use-only-tar-bz2: true | |
| - name: Cache conda | |
| uses: actions/cache@v3 | |
| id: condacache | |
| env: | |
| # Increase this value to reset cache if .environment.yml has not changed | |
| CACHE_NUMBER: 0 | |
| with: | |
| path: | | |
| /usr/share/miniconda/envs/lmfdb | |
| key: | |
| ${{ runner.os }}-conda-${{ env.CACHE_NUMBER }}-${{ | |
| hashFiles('.environment.yml') }} | |
| - name: Run install script | |
| # Only need to run install when deps has been changed | |
| if: steps.condacache.outputs.cache-hit != 'true' | |
| run: conda env create -f .environment.yml || conda env update -f .environment.yml | |
| - name: Show conda info | |
| shell: bash -l {0} | |
| run: | | |
| conda info | |
| conda list | |
| - name: Cache pip | |
| uses: actions/cache@v3 | |
| with: | |
| # This path is specific to Ubuntu | |
| path: ~/.cache/pip | |
| # Look to see if there is a cache hit for the corresponding requirements file | |
| key: ${{ runner.os }}-pip-${{ hashFiles('requirements.txt') }} | |
| restore-keys: | | |
| ${{ runner.os }}-pip- | |
| ${{ runner.os }}- | |
| - name: pip stuff | |
| shell: bash -l {0} | |
| run: | | |
| sage -pip install -r requirements.txt | |
| pip install pyflakes pylint pycodestyle | |
| - name: checking that we didn't miss any test files | |
| shell: bash -l {0} | |
| # If this fails you need to update the file list above and file count | |
| run: test $(find lmfdb -name 'test_*.py' -or -name '*_test.py' | wc -l) -eq 41 | |
| - name: Config LMFDB to run tests against proddb | |
| if: matrix.files != 'lint' && matrix.server == 'proddb' | |
| env: | |
| LMFDB_CI_ACCESS: ${{ secrets.LMFDB_CI_ACCESS }} | |
| shell: bash -l {0} | |
| run: | | |
| sage -python lmfdb/utils/config.py --postgresql-host proddb.lmfdb.xyz --postgresql-pass "$LMFDB_CI_ACCESS" | |
| - name: Run LMFDB tests | |
| if: matrix.files != 'lint' | |
| shell: bash -l {0} | |
| run: tox -e tests -- ${{ matrix.files}} | |
| - name: Run linting | |
| if: matrix.files == 'lint' | |
| shell: bash -l {0} | |
| run: tox -e lint |