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Feature/arkode sts #541

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Commits on Jul 31, 2024

  1. Updated ark_heat2D.cpp with changes from develop branch (mainly fixes… 

    … to comments)
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  2. Removed commented-out lines

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  3. Removed hard-coded print statement, since it is replicated on all MPI… 

    … ranks
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  4. Minor cleanup

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  5. Added MPI-parallel arkHeat2D example that uses LSRKStep

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  6. Added better error handling to ark_heat2D_hypre_pfmg.cpp

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Commits on Aug 6, 2024

  1. Added explicit support for diffusion-2D benchmark (using LSRKStep)

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Commits on Aug 27, 2024

  1. Some progress - SSP

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  2. SSPs2 is ready!

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  3. SSPs3 is ready!

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  4. SSP104 is ready!

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Commits on Aug 28, 2024

  1. LSRKStepSetSSPStageNum

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  2. allow s=10 in LSRKStepSetSSPStageNum for SSP10_4

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  3. Documentation

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  4. SSP Stats

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  5. bug fix

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Commits on Aug 29, 2024

  1. Minor updates with Dan!

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  2. updated weights of SSP22 and SSP32

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Commits on Sep 3, 2024

  1. SSP methods are ready now!

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Commits on Sep 4, 2024

  1. SSP is ready for reviews

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Commits on Sep 5, 2024

  1. Initial draft of sod shock tube example to test the new SSPRK methods… 

    … from LSRKStep
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  2. Merge branch 'feature/arkode-sts' of github.com:LLNL/sundials into fe… 

    …ature/arkode-sts
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Commits on Sep 7, 2024

  1. Finished debugging sod shock tube problem

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  2. Minor plotting updates

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Commits on Sep 9, 2024

  1. fixed example testing fails

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Commits on Sep 10, 2024

  1. Merged with the develop

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  2. Updated Fortran interfaces

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  3. formatting

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  4. deleting a space

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  5. Formatting

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  6. formatting

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  7. Formatting

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Commits on Sep 11, 2024

  1. Merge branch 'develop' into feature/arkode-sts

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  2. Formatting

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  3. Merge branch 'feature/arkode-sts' of github.com:LLNL/sundials into fe… 

    …ature/arkode-sts
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  4. Formatting

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  5. Formatting

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  6. Formatting

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  7. Formatting

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  8. Formatting

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  9. Update CHANGELOG.md 

    Co-authored-by: Daniel R. Reynolds <[email protected]>
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  10. Update doc/shared/RecentChanges.rst 

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  11. Update doc/arkode/guide/source/Constants.rst 

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  12. Update doc/arkode/guide/source/Mathematics.rst 

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  13. Update doc/arkode/guide/source/Mathematics.rst 

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  14. revision

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  15. Update doc/arkode/guide/source/Usage/LSRKStep/User_callable.rst 

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  16. Update doc/arkode/guide/source/Mathematics.rst 

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  17. Update doc/arkode/guide/source/Usage/LSRKStep/User_callable.rst 

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  18. Update doc/arkode/guide/source/Usage/LSRKStep/User_callable.rst 

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  19. Update doc/arkode/guide/source/Usage/LSRKStep/User_callable.rst 

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  20. Update doc/arkode/guide/source/Usage/LSRKStep/User_callable.rst 

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  21. Update doc/arkode/guide/source/Usage/LSRKStep/User_callable.rst 

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  22. Update doc/arkode/guide/source/Usage/LSRKStep/User_callable.rst 

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  23. Update doc/arkode/guide/source/Usage/LSRKStep/User_callable.rst 

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  24. Update doc/arkode/guide/source/Usage/LSRKStep/User_callable.rst 

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  25. Update doc/arkode/guide/source/Usage/LSRKStep/User_callable.rst 

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  26. Update doc/arkode/guide/source/Usage/LSRKStep/User_callable.rst 

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  27. Update doc/arkode/guide/source/Usage/LSRKStep/User_callable.rst 

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  28. Update doc/arkode/guide/source/Usage/LSRKStep/User_callable.rst 

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  29. Update doc/arkode/guide/source/Mathematics.rst 

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  30. Update doc/arkode/guide/source/Usage/LSRKStep/User_callable.rst 

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  31. Update doc/arkode/guide/source/Usage/LSRKStep/User_callable.rst 

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  32. Update doc/arkode/guide/source/Usage/LSRKStep/User_callable.rst 

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  33. Update doc/arkode/guide/source/Usage/LSRKStep/User_callable.rst 

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  34. Update doc/arkode/guide/source/Usage/LSRKStep/User_callable.rst 

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  35. Update doc/arkode/guide/source/Usage/LSRKStep/User_callable.rst 

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  36. Update doc/arkode/guide/source/Usage/LSRKStep/User_supplied.rst 

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  37. Update doc/arkode/guide/source/Usage/LSRKStep/User_supplied.rst 

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  38. Update doc/shared/sundials.bib 

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  39. Update src/arkode/arkode_lsrkstep_io.c 

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  40. reinit updates

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  41. Update src/arkode/arkode_lsrkstep.c 

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  42. Update examples/arkode/C_serial/lsrk_analytic.c 

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  43. Update examples/arkode/C_serial/lsrk_analytic.c 

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Commits on Sep 12, 2024

  1. Apply suggestions from code review 

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  2. Formatting

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  3. Update src/arkode/arkode_lsrkstep_io.c 

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Commits on Sep 13, 2024

  1. Fixed Num of RHS evaluations

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  2. added new functions

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  3. printf to arkProcessError

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  4. printf to arkProcessError

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  5. N_VLinearSum to N_VLinearCombination

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  6. step module parameters

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  7. step_mem->q update

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  8. comment update

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  9. match updates with a different branch 

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Commits on Sep 16, 2024

  1. order updates

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  2. stagemaxlimit problem

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Commits on Sep 17, 2024

  1. Fixed LSRK constant descriptions in table

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  2. Ran formatter, and regenerated Fortran interfaces

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  3. Fixed vestigial documentation references to ARKStep in other stepper … 

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  4. Minor cleanup

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  5. Renamed 'explicit' to 'explicitSTS'

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  6. Fixed conversion 'error'

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  7. formatting

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  8. Fixed conversion 'error'

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  9. Fixed unused variable 'error'

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  10. Fixed unused variable, shadow, and reorder 'errors'

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  11. Fixed newly-introduced compilation error; added analytical solution f… 

    …or sod shock problem
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  12. Fixed unused variable 'error'

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  13. formatting

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  14. formatting

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  15. revision

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  16. revision

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  17. formatting

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Commits on Sep 18, 2024

  1. precision

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  2. revision

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Commits on Sep 19, 2024

  1. Applied some suggestions from code review

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  2. Made recommended changes from code review

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  3. revision

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  4. Moved 'using namespace std' to .cpp file

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  5. removed use of SUNR* math functions

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  6. merged

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  7. formatting

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  8. nfe

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  9. Merge branch 'feature/arkode-sts' of github.com:LLNL/sundials into fe… 

    …ature/arkode-sts
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  10. revision

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Commits on Sep 20, 2024

  1. Applied recommendation from code review

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  2. revision

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Commits on Sep 21, 2024

  1. Formatting

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  2. Formatting

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  3. Formatting

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  4. revision

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  5. Formatting

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  6. Formatting

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  7. revision

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  8. Bugfix & formatting

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  9. Formatting

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  10. Formatting

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  11. Test Failure issue

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  12. revert for testing failure

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  13. Formatting

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Commits on Sep 23, 2024

  1. revision

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Commits on Sep 24, 2024

  1. revision

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  2. Formatting

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Commits on Sep 25, 2024

  1. revision

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  2. revision

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  3. Updated diffusion_2D benchmarkbased on PR feedback

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  4. Merge branch 'feature/arkode-sts' of github.com:LLNL/sundials into fe… 

    …ature/arkode-sts
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  5. Apply suggestions from code review 

    Co-authored-by: David Gardner <[email protected]>
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  6. Added braces (I feel like I'm at the orthodontist) and changed some c… 

    …omments
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  7. Apply suggestions from code review 

    Co-authored-by: David Gardner <[email protected]>
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  8. more braces

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  9. Formatting

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  10. two more NULL -> nullptr

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  11. Apply suggestions from code review 

    Co-authored-by: David Gardner <[email protected]>
    @drreynolds @gardner48
    drreynolds and gardner48 authored Sep 25, 2024
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  12. revision

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  13. Merge branch 'feature/arkode-sts' of github.com:LLNL/sundials into fe… 

    …ature/arkode-sts
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  14. Apply suggestions from code review 

    Co-authored-by: David Gardner <[email protected]>
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Commits on Sep 26, 2024

  1. revert NV_Ith_S

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  2. revision

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  3. revision

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Commits on Sep 27, 2024

  1. Formatting

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  2. revision

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Commits on Sep 28, 2024

  1. suncomplextype

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  2. Formatting

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Commits on Sep 29, 2024

  1. N_Vector Fe

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Commits on Sep 30, 2024

  1. Revert "suncomplextype" 

    This reverts commit 9eb4bff.
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  2. post revert fixes

    @gardner48
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  3. apply formatting

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  4. update swig

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Commits on Oct 1, 2024

  1. fixed time step and fn issues

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  2. ss fixed

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  3. Formatting

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  4. Apply suggestions from code review 

    batch commit

Co-authored-by: David Gardner <[email protected]>
Co-authored-by: Daniel R. Reynolds <[email protected]>
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  5. output updates

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  6. SSP43

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  7. Formatting

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  8. Revision

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  9. revision

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  10. Formatting

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Commits on Oct 2, 2024

  1. ProcessStage and DEBUG modes

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  2. Revision

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Commits on Oct 3, 2024

  1. reduce redundancy

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  2. reduce redundancy vol.2

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  3. reduce reduncancy

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  4. Bug fix

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  5. revision

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  6. Revision

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  7. Revision

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  8. retry_contraction_fac

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Commits on Oct 4, 2024

  1. num_of_retries

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  2. default controller is removed

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  3. LSRKStepSetSSPStageNum

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  4. LSRKStepSetDomEigFrequency

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  5. LSRKStepSetDomEigSafetyFactor

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  6. dom_eig_fn check

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  7. output files

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  8. Formatting

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  9. build and test failure fix

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  10. build and test

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  11. build and test failure

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  12. Revert and bug fix

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  13. Fixed broken LSRKStepCreateSTS call due to PR revisions

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  14. Formatting

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  15. Merge branch 'feature/arkode-sts' of github.com:LLNL/sundials into fe… 

    …ature/arkode-sts
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  16. fixedstep

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Commits on Oct 5, 2024

  1. fn_is_current

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  2. returns

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  3. consistency

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  4. revision

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  5. Formatting

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Commits on Oct 7, 2024

  1. Build-Test Fixes

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  2. Formatting

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Commits on Oct 8, 2024

  1. Unresolved issues and build test failure

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  2. Formatting & build test failure

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  3. Formatting

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  4. adjust which test runs in single presicion and updated tolerances

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  5. Merge branch 'feature/arkode-sts' of github.com:LLNL/sundials into fe… 

    …ature/arkode-sts
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  6. updated answers repo

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  7. update the test problem stiffness for single

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    maggul committed Oct 8, 2024
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  8. Formatting

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  9. Merge branch 'develop' into feature/arkode-sts

    @drreynolds
    drreynolds authored Oct 8, 2024
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  10. Removed single precision CI test, updated ordering to fit alphabetica… 

    …l style
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  11. Merge branch 'feature/arkode-sts' of github.com:LLNL/sundials into fe… 

    …ature/arkode-sts
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Commits on Oct 9, 2024

  1. CI test bug-fix

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  2. CI testing bug-fix

    @maggul
    maggul committed Oct 9, 2024
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  3. Updated answer files

    @maggul
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  4. Cleaned up lsrkStep_PrintAllStats

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  5. Cleaned up Init function to properly handle the case where an SSP sol… 

    …ver is constructed but the method is not manually specified
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  6. bugfix

    @drreynolds
    drreynolds committed Oct 9, 2024
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  7. Fixed uninitialized warning

    @drreynolds
    drreynolds committed Oct 9, 2024
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  8. Formatting

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  9. Merge branch 'feature/arkode-sts' of github.com:LLNL/sundials into fe… 

    …ature/arkode-sts
    @drreynolds
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  10. updated answers commit

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  11. merged

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  12. Update answers

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  13. update output files for testing with doubles

    @maggul
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  14. Added missing .out files

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  15. Merge branch 'feature/arkode-sts' of github.com:LLNL/sundials into fe… 

    …ature/arkode-sts
    @drreynolds
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  16. update output files

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Commits on Oct 10, 2024

  1. extended presicion debug

    @maggul
    maggul committed Oct 10, 2024
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  2. update output files

    @maggul
    maggul committed Oct 10, 2024
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  3. Formatting

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    maggul committed Oct 10, 2024
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  4. update output files

    @maggul
    maggul committed Oct 10, 2024
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  5. update output files

    @maggul
    maggul committed Oct 10, 2024
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  6. Fixed specification of Lagrange interpolation default

    @drreynolds
    drreynolds committed Oct 10, 2024
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  7. Updated mechanism for setting up default SSP and STS methods

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  8. Merge branch 'feature/arkode-sts' of github.com:LLNL/sundials into fe… 

    …ature/arkode-sts
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  9. formatting

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  10. A few more minor cleanup items

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Commits on Oct 15, 2024

  1. Merge branch 'develop' into feature/arkode-sts

    @drreynolds
    drreynolds authored Oct 15, 2024
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  2. merge with develop

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    maggul committed Oct 15, 2024
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Commits on Oct 16, 2024

  1. GetNumRhsEvals

    @maggul
    maggul committed Oct 16, 2024
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  2. Formatting and swig

    @maggul
    maggul committed Oct 16, 2024
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  3. update outputs

    @maggul
    maggul committed Oct 16, 2024
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  4. functions reordering

    @maggul
    maggul committed Oct 16, 2024
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  5. formatting

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    maggul committed Oct 16, 2024
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  6. documentation

    @maggul
    maggul committed Oct 16, 2024
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