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WIP: EDGE3D update #478

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WIP: EDGE3D update #478

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702238f
use symmetry for storage on innermost loop (but not outermost)
pguthrey Sep 9, 2024
050da7e
Merge branch 'develop' into feature/guthrey1/edge_3d_update
rhornung67 Oct 10, 2024
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205 changes: 197 additions & 8 deletions src/apps/EDGE3D.hpp
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Original file line number Diff line number Diff line change
Expand Up @@ -20,13 +20,13 @@
/// double z[NB] = {z0[i],z1[i],z2[i],z3[i],z4[i],z5[i],z6[i],z7[i]};
/// double edge_matrix[EB][EB];
///
// Get integration points and weights
/// // Get integration points and weights
/// double qpts_1d[MAX_QUAD_ORDER];
/// double wgts_1d[MAX_QUAD_ORDER];
///
/// get_quadrature_rule(quad_type, quad_order, qpts_1d, wgts_1d);
///
// Compute cell centered Jacobian
/// // Compute cell centered Jacobian
/// const double jxx_cc = Jxx(x, y, z, 0.25, 0.25, 0.25, 0.25);
/// const double jxy_cc = Jxy(x, y, z, 0.25, 0.25, 0.25, 0.25);
/// const double jxz_cc = Jxz(x, y, z, 0.25, 0.25, 0.25, 0.25);
Expand All @@ -37,20 +37,20 @@
/// const double jzy_cc = Jzy(x, y, z, 0.25, 0.25, 0.25, 0.25);
/// const double jzz_cc = Jzz(x, y, z, 0.25, 0.25, 0.25, 0.25);
///
// Compute cell centered Jacobian determinant
/// // Compute cell centered Jacobian determinant
/// const double detj_cc = compute_detj(
/// jxx_cc, jxy_cc, jxz_cc,
/// jyx_cc, jyy_cc, jyz_cc,
/// jzx_cc, jzy_cc, jzz_cc);
///
// Initialize the stiffness matrix
/// // Initialize the stiffness matrix
/// for (int m = 0; m < EB; m++) {
/// for (int p = m; p < EB; p++) {
/// matrix[m][p] = 0.0;
/// }
/// }
///
// Compute values at each quadrature point
/// // Compute values at each quadrature point
/// for ( int i = 0; i < quad_order; i++ ) {
///
/// const double xloc = qpts_1d[i];
Expand Down Expand Up @@ -80,7 +80,7 @@
/// double dbasisy[EB] = {0};
/// curl_edgebasis_y(dbasisy, tmpy, yloc);
///
// Differeniate basis with respect to z at this quadrature point
/// // Differeniate basis with respect to z at this quadrature point
///
/// for ( int k = 0; k < quad_order; k++ ) {
///
Expand Down Expand Up @@ -158,14 +158,14 @@
/// dbasisx, dbasisy, dbasisz,
/// tdbasisx, tdbasisy, tdbasisz);
///
// the inner product: alpha*<w_i, w_j>
/// // the inner product: alpha*<w_i, w_j>
/// inner_product(
/// detjwgts*alpha,
/// tebasisx, tebasisy, tebasisz,
/// tebasisx, tebasisy, tebasisz,
/// matrix, true);
///
// the inner product: beta*<Curl(w_i), Curl(w_j)>
/// // the inner product: beta*<Curl(w_i), Curl(w_j)>
/// inner_product(
/// detjwgts*beta,
/// tdbasisx, tdbasisy, tdbasisz,
Expand Down Expand Up @@ -360,6 +360,195 @@ RAJA_INLINE void edge_MpSmatrix(
}
}

RAJA_HOST_DEVICE
RAJA_INLINE void symmetric_edge_MpSmatrix(
const rajaperf::Real_type (&x)[NB],
const rajaperf::Real_type (&y)[NB],
const rajaperf::Real_type (&z)[NB],
rajaperf::Real_type alpha,
rajaperf::Real_type beta,
const rajaperf::Real_type detj_tol,
const rajaperf::Int_type quad_type,
const rajaperf::Int_type quad_order,
rajaperf::Real_type (&matrix)[EB][EB])
{
// Get integration points and weights
rajaperf::Real_type qpts_1d[MAX_QUAD_ORDER];
rajaperf::Real_type wgts_1d[MAX_QUAD_ORDER];

get_quadrature_rule(quad_type, quad_order, qpts_1d, wgts_1d);

// Compute cell centered Jacobian
const rajaperf::Real_type jxx_cc = Jxx(x, y, z, 0.25, 0.25, 0.25, 0.25);
const rajaperf::Real_type jxy_cc = Jxy(x, y, z, 0.25, 0.25, 0.25, 0.25);
const rajaperf::Real_type jxz_cc = Jxz(x, y, z, 0.25, 0.25, 0.25, 0.25);
const rajaperf::Real_type jyx_cc = Jyx(x, y, z, 0.25, 0.25, 0.25, 0.25);
const rajaperf::Real_type jyy_cc = Jyy(x, y, z, 0.25, 0.25, 0.25, 0.25);
const rajaperf::Real_type jyz_cc = Jyz(x, y, z, 0.25, 0.25, 0.25, 0.25);
const rajaperf::Real_type jzx_cc = Jzx(x, y, z, 0.25, 0.25, 0.25, 0.25);
const rajaperf::Real_type jzy_cc = Jzy(x, y, z, 0.25, 0.25, 0.25, 0.25);
const rajaperf::Real_type jzz_cc = Jzz(x, y, z, 0.25, 0.25, 0.25, 0.25);

// Compute cell centered Jacobian determinant
const rajaperf::Real_type detj_cc = compute_detj(
jxx_cc, jxy_cc, jxz_cc,
jyx_cc, jyy_cc, jyz_cc,
jzx_cc, jzy_cc, jzz_cc);

// Initialize the stiffness matrix
for (rajaperf::Int_type m = 0; m < EB; m++) {
for (rajaperf::Int_type p = m; p < EB; p++) {
matrix[m][p] = 0.0;
}
}

constexpr rajaperf::Int_type symmetric_size = (EB*(EB+1))/2;
rajaperf::Real_type symmetric_matrix[symmetric_size];

// Initialize the symmetric stiffness matrix
for (rajaperf::Int_type m = 0; m < symmetric_size; m++) {
symmetric_matrix[m] = 0.0;
}

// Compute values at each quadrature point
for ( rajaperf::Int_type i = 0; i < quad_order; i++ ) {

const rajaperf::Real_type xloc = qpts_1d[i];
const rajaperf::Real_type tmpx = 1. - xloc;

rajaperf::Real_type dbasisx[EB] = {0};
curl_edgebasis_x(dbasisx, tmpx, xloc);

for ( rajaperf::Int_type j = 0; j < quad_order; j++ ) {

const rajaperf::Real_type yloc = qpts_1d[j];
const rajaperf::Real_type wgtxy = wgts_1d[i]*wgts_1d[j];
const rajaperf::Real_type tmpy = 1. - yloc;

rajaperf::Real_type tmpxy = tmpx*tmpy;
rajaperf::Real_type xyloc = xloc*yloc;
rajaperf::Real_type tmpxyloc = tmpx*yloc;
rajaperf::Real_type xloctmpy = xloc*tmpy;

const rajaperf::Real_type jzx = Jzx(x, y, z, tmpxy, xloctmpy, xyloc, tmpxyloc);
const rajaperf::Real_type jzy = Jzy(x, y, z, tmpxy, xloctmpy, xyloc, tmpxyloc);
const rajaperf::Real_type jzz = Jzz(x, y, z, tmpxy, xloctmpy, xyloc, tmpxyloc);

rajaperf::Real_type ebasisz[EB] = {0};
edgebasis_z(ebasisz, tmpxy, xloctmpy, xyloc, tmpxyloc);

rajaperf::Real_type dbasisy[EB] = {0};
curl_edgebasis_y(dbasisy, tmpy, yloc);

// Differeniate basis with respect to z at this quadrature point

for ( rajaperf::Int_type k = 0; k < quad_order; k++ ) {

const rajaperf::Real_type zloc = qpts_1d[k];
const rajaperf::Real_type wgts = wgtxy*wgts_1d[k];
const rajaperf::Real_type tmpz = 1. - zloc;

const rajaperf::Real_type tmpxz = tmpx*tmpz;
const rajaperf::Real_type tmpyz = tmpy*tmpz;

const rajaperf::Real_type xzloc = xloc*zloc;
const rajaperf::Real_type yzloc = yloc*zloc;

const rajaperf::Real_type tmpyzloc = tmpy*zloc;
const rajaperf::Real_type tmpxzloc = tmpx*zloc;

const rajaperf::Real_type yloctmpz = yloc*tmpz;
const rajaperf::Real_type xloctmpz = xloc*tmpz;

const rajaperf::Real_type jxx = Jxx(x, y, z, tmpyz, yloctmpz, tmpyzloc, yzloc);
const rajaperf::Real_type jxy = Jxy(x, y, z, tmpyz, yloctmpz, tmpyzloc, yzloc);
const rajaperf::Real_type jxz = Jxz(x, y, z, tmpyz, yloctmpz, tmpyzloc, yzloc);
const rajaperf::Real_type jyx = Jyx(x, y, z, tmpxz, xloctmpz, tmpxzloc, xzloc);
const rajaperf::Real_type jyy = Jyy(x, y, z, tmpxz, xloctmpz, tmpxzloc, xzloc);
const rajaperf::Real_type jyz = Jyz(x, y, z, tmpxz, xloctmpz, tmpxzloc, xzloc);

rajaperf::Real_type jinvxx, jinvxy, jinvxz,
jinvyx, jinvyy, jinvyz,
jinvzx, jinvzy, jinvzz,
detj_unfixed, detj, abs_detj, invdetj;

jacobian_inv(
jxx, jxy, jxz,
jyx, jyy, jyz,
jzx, jzy, jzz,
detj_cc, detj_tol,
jinvxx, jinvxy, jinvxz,
jinvyx, jinvyy, jinvyz,
jinvzx, jinvzy, jinvzz,
detj_unfixed, detj, abs_detj, invdetj);

const rajaperf::Real_type detjwgts = wgts*abs_detj;

rajaperf::Real_type ebasisx[EB] = {0};
edgebasis_x(ebasisx, tmpyz, yloctmpz, tmpyzloc, yzloc);

rajaperf::Real_type ebasisy[EB] = {0};
edgebasis_y(ebasisy, tmpxz, xloctmpz, tmpxzloc, xzloc);

rajaperf::Real_type dbasisz[EB] = {0};
curl_edgebasis_z(dbasisz, tmpz, zloc);

const rajaperf::Real_type inv_abs_detj = 1./(abs_detj+ptiny);

rajaperf::Real_type tebasisx[EB] = {0};
rajaperf::Real_type tebasisy[EB] = {0};
rajaperf::Real_type tebasisz[EB] = {0};

transform_edge_basis(
jinvxx, jinvxy, jinvxz,
jinvyx, jinvyy, jinvyz,
jinvzx, jinvzy, jinvzz,
ebasisx, ebasisy, ebasisz,
tebasisx, tebasisy, tebasisz);

rajaperf::Real_type tdbasisx[EB] = {0};
rajaperf::Real_type tdbasisy[EB] = {0};
rajaperf::Real_type tdbasisz[EB] = {0};

transform_curl_edge_basis(
jxx, jxy, jxz,
jyx, jyy, jyz,
jzx, jzy, jzz,
inv_abs_detj,
dbasisx, dbasisy, dbasisz,
tdbasisx, tdbasisy, tdbasisz);

// the inner product: alpha*<w_i, w_j>
inner_product(
detjwgts*alpha,
tebasisx, tebasisy, tebasisz,
tebasisx, tebasisy, tebasisz,
symmetric_matrix);

// the inner product: beta*<Curl(w_i), Curl(w_j)>
inner_product(
detjwgts*beta,
tdbasisx, tdbasisy, tdbasisz,
tdbasisx, tdbasisy, tdbasisz,
symmetric_matrix);
}
}
}

// write back to matrix
rajaperf::Int_type offset = 0;
for (rajaperf::Int_type p = 0; p < EB; p++) {

matrix[p][p] = symmetric_matrix[offset];
for (rajaperf::Int_type m = 1; m < (EB-p); m++) {
auto x = symmetric_matrix[offset + m];
matrix[p][m] = x;
matrix[m][p] = x;
}
offset += (EB-p);
}
}

#define EDGE3D_DATA_SETUP \
Real_ptr x = m_x; \
Real_ptr y = m_y; \
Expand Down
33 changes: 33 additions & 0 deletions src/apps/mixed_fem_helper.hpp
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Original file line number Diff line number Diff line change
Expand Up @@ -309,6 +309,39 @@ constexpr void inner_product(
}
}

template<rajaperf::Int_type M>
RAJA_HOST_DEVICE
constexpr void inner_product(
const rajaperf::Real_type weight,
const rajaperf::Real_type (&basis_1_x)[M],
const rajaperf::Real_type (&basis_1_y)[M],
const rajaperf::Real_type (&basis_1_z)[M],
const rajaperf::Real_type (&basis_2_x)[M],
const rajaperf::Real_type (&basis_2_y)[M],
const rajaperf::Real_type (&basis_2_z)[M],
rajaperf::Real_type (&matrix)[(M*(M+1))/2])
{
// inner product is <basis_2, basis_1>
rajaperf::Int_type offset = 0;

for (rajaperf::Int_type p = 0; p < M; p++) {

const rajaperf::Real_type txi = basis_2_x[p];
const rajaperf::Real_type tyi = basis_2_y[p];
const rajaperf::Real_type tzi = basis_2_z[p];

for (rajaperf::Int_type m = 0; m < (M-p); m++) {

const rajaperf::Real_type txj = basis_1_x[p+m];
const rajaperf::Real_type tyj = basis_1_y[p+m];
const rajaperf::Real_type tzj = basis_1_z[p+m];
matrix[offset + m] += weight*(txi*txj + tyi*tyj + tzi*tzj);
}

offset += (M-p);
}
}

constexpr rajaperf::Int_type flops_bad_zone_algorithm()
{
return 5;
Expand Down
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