Fixed low contamination issue in RANK #101
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| # This workflow will increment the release version number | |
| # Validates new version | |
| # Publishes to PyPi | |
| # Validates new release | |
| # Publishes to Conda | |
| # Creates new GitHub release | |
| name: Publish Release | |
| on: | |
| push: | |
| branches: | |
| - main | |
| jobs: | |
| release: | |
| if: contains(github.event.head_commit.message, 'bump') && github.actor == 'KulikDM' | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Checkout repository | |
| uses: actions/checkout@v4 | |
| - name: Set up Python | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: "3.10" | |
| - name: Increment version number | |
| run: | | |
| printf "Reading the current version from the file\n" | |
| current_version=$(grep -oP "__version__ = '\K(\d+\.\d+\.\d+)" pythresh/version.py) | |
| if [[ -z $current_version ]]; then | |
| current_version="0.0.0" | |
| printf "\nIssue fetching current version $current_version\n" | |
| exit 1 | |
| fi | |
| printf "\nIncrementing the version number\n" | |
| IFS='.' read -r -a version_parts <<< "$current_version" | |
| patch=$(( ${version_parts[2]} + 1 )) | |
| printf "\nHandling version part overflow\n" | |
| if (( patch > 9 )); then | |
| patch=0 | |
| minor=$(( ${version_parts[1]} + 1 )) | |
| if (( minor > 9 )); then | |
| minor=0 | |
| major=$(( ${version_parts[0]} + 1 )) | |
| else | |
| major=${version_parts[0]} | |
| fi | |
| else | |
| minor=${version_parts[1]} | |
| major=${version_parts[0]} | |
| fi | |
| new_version="${major}.${minor}.$patch" | |
| printf "\nUpdating the file with the new version number\n" | |
| sed -i "s/__version__ = '${current_version}'/__version__ = '${new_version}'/" pythresh/version.py | |
| echo "new_version=$new_version" >> $GITHUB_ENV | |
| echo "WORK_DIR=$(pwd)" >> $GITHUB_ENV | |
| printf "\nNew version updated from $current_version to $new_version\n" | |
| - name: Validate new PyPi version | |
| run: | | |
| printf "Getting lastest pypi information\n" | |
| url="https://pypi.org/pypi/pythresh/json" | |
| current_pypi_version=$(curl -s "$url" | jq -r '.info.version') | |
| printf "\nValidating version update\n" | |
| if [ "$current_pypi_version" == "${{ env.new_version }}" ]; then | |
| printf "\nCurrent PyPi version $current_pypi_version matches ${{ env.new_version }}\n" | |
| exit 1 | |
| fi | |
| printf "\nNew version validated\n" | |
| - name: Commit and push changes | |
| env: | |
| GIT_USER: ${{ secrets.GIT_USER }} | |
| GIT_EMAIL: ${{ secrets.GIT_EMAIL }} | |
| GIT_TOKEN: ${{ secrets.GIT_TOKEN }} | |
| run: | | |
| printf "Preparing to commit\n" | |
| git config --global user.name $GIT_USER | |
| git config --global user.email $GIT_EMAIL | |
| git commit -a -m "Updated to version ${{ env.new_version }}" | |
| printf "\nPushing the changes to the repository\n" | |
| git push origin main | |
| printf "\nNew version commited\n" | |
| sleep 1m | |
| - name: Publish to PyPI | |
| env: | |
| TWINE_USERNAME: __token__ | |
| TWINE_PASSWORD: ${{ secrets.PYPI_API_TOKEN }} | |
| run: | | |
| printf "Preparing to install dependancies\n" | |
| python -m pip install --upgrade pip setuptools wheel twine | |
| python setup.py sdist | |
| printf "\nPackage created locally\n" | |
| twine upload dist/* | |
| printf "\nNew PyPi release created\n" | |
| sleep 10m | |
| - name: Validate new Conda version | |
| run: | | |
| printf "Getting lastest pypi information\n" | |
| url="https://pypi.org/pypi/pythresh/json" | |
| latest_version=$(curl -s "$url" | jq -r '.info.version') | |
| latest_sha256=$(curl -s "$url" | jq -r '.releases."'"$latest_version"'"[0].digests."sha256"') | |
| echo "Validating version update" | |
| if [ "$latest_version" != "${{ env.new_version }}" ]; then | |
| printf "\nNew Conda version $latest_version does not match new PyPi version ${{ env.new_version }}\n" | |
| exit 1 | |
| fi | |
| echo "latest_version=$latest_version" >> $GITHUB_ENV | |
| echo "latest_sha256=$latest_sha256" >> $GITHUB_ENV | |
| printf "\nNew PyPi version validated\n" | |
| - name: Update Conda feedstock repository | |
| env: | |
| GIT_USER: ${{ secrets.GIT_USER }} | |
| GIT_EMAIL: ${{ secrets.GIT_EMAIL }} | |
| GIT_TOKEN: ${{ secrets.GIT_TOKEN }} | |
| run: | | |
| printf "Preparing to clone feedstock repository\n" | |
| git config --global user.name $GIT_USER | |
| git config --global user.email $GIT_EMAIL | |
| git clone https://$GIT_USER:[email protected]/conda-forge/pythresh-feedstock.git | |
| cd pythresh-feedstock | |
| printf "\nReading the original meta.yaml file\n" | |
| meta_yaml=$(cat recipe/meta.yaml) | |
| printf "\nUpdating the version and sha256\n" | |
| updated_meta_yaml=$(echo "{% set name = \"pythresh\" %}" && echo "{% set version = \"${{ env.latest_version }}\" %}" && tail -n +3 recipe/meta.yaml | sed -E "s/sha256: .*$/sha256: ${{ env.latest_sha256 }}/") | |
| printf "\nWriting the updated meta.yaml file\n" | |
| echo "$updated_meta_yaml" > recipe/meta.yaml | |
| printf "\nCommitting the changes\n" | |
| git add recipe/meta.yaml | |
| git commit -m "Update to version ${{ env.latest_version }}" | |
| printf "\nPushing the changes to the repository" | |
| git push origin main | |
| printf "\nNew Conda release created\n" | |
| - name: Create GitHub release | |
| env: | |
| GIT_TOKEN: ${{ secrets.GIT_TOKEN }} | |
| run: | | |
| printf "Preparing to create new GitHub release\n" | |
| cd "${{ env.WORK_DIR }}" | |
| TAG_NAME="v${{ env.latest_version }}" | |
| RELEASE_TITLE=$TAG_NAME | |
| printf "\nCreating release notes\n" | |
| RELEASE_NOTES="## What's Changed"$'\n' | |
| while IFS= read -r line; do | |
| RELEASE_NOTES+="* $line"$'\n' | |
| done < <(grep -A 1 "v<${{ env.latest_version }}>," CHANGES.txt | grep -o -- "-- .*" | sed -e "s/^-- //") | |
| RELEASE_NOTES=$(echo "$RELEASE_NOTES" | sed -E ':a;N;$!ba;s/\r{0,1}\n/\\n/g') | |
| printf "\nPosting new release\n" | |
| JSON_DATA="{ \"tag_name\": \"$TAG_NAME\", \"name\": \"$RELEASE_TITLE\", \"body\": \"$RELEASE_NOTES\", \"draft\": false, \"prerelease\": false }" | |
| curl -X POST "https://api.github.com/repos/KulikDM/pythresh/releases" \ | |
| -H "Content-Type: application/json" \ | |
| -H "Authorization: Bearer $GIT_TOKEN" \ | |
| -d "$JSON_DATA" | |
| printf "\nNew release posted succesfully\n" |