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Deploy/Installation Files/plug-ins-installer-files/Magic harvest v1.2.txt
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| LandisData Extension | ||
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| Name "Magic Harvest" | ||
| Version "1.2" | ||
| Type disturbance:harvest | ||
| Assembly Landis.Extension.MagicHarvest | ||
| Class Landis.Extension.MagicHarvest.PlugIn | ||
| Description "Allows the update of the parameters of the harvest extension during the simulation" | ||
| CoreVersion 7.0 |
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| 2022-06-01 13:03:43,630 - LANDIS-II 7.0 (7) | ||
| 2022-06-01 13:03:43,639 - | ||
| 2022-06-01 13:03:43,714 - Loading scenario from file "test_scenario.txt" ... | ||
| 2022-06-01 13:03:43,783 - Initialized random number generator with user-supplied seed = 4 357 | ||
| 2022-06-01 13:03:43,784 - Loading species data from file "./input/species_ecoregions/species.txt" ... | ||
| 2022-06-01 13:03:43,813 - Loading ecoregions from file "./input/species_ecoregions/ecoregions.txt" ... | ||
| 2022-06-01 13:03:43,831 - Initializing landscape from ecoregions map "./input/species_ecoregions/ecoregions.tif" ... | ||
| 2022-06-01 13:03:43,845 - Cell length = 100 m, cell area = 1 ha | ||
| 2022-06-01 13:03:43,846 - Map dimensions: 100 rows by 100 columns = 10 000 cells | ||
| 2022-06-01 13:03:43,854 - Sites: 9 539 active (95.4 %), 461 inactive (4.6 %) | ||
| 2022-06-01 13:03:43,864 - Loading Age-only Succession extension ... | ||
| 2022-06-01 13:03:43,919 - Registering Data: Succession.AgeCohorts. | ||
| 2022-06-01 13:03:43,921 - Loading dynamic input data from file "./input/succession/age-only-succession-dynamic-inputs.txt" ... | ||
| 2022-06-01 13:03:43,924 - Dynamic Input Parser: Add new year = 0. | ||
| 2022-06-01 13:03:43,933 - Registering Data: TimeOfLastSuccession. | ||
| 2022-06-01 13:03:43,933 - Registering Data: Shade. | ||
| 2022-06-01 13:03:43,934 - Creating Dispersal Neighborhood List. | ||
| 2022-06-01 13:03:43,934 - Dispersal: NeighborRadius=5050, CellLength=100, numCellRadius=50 | ||
| 2022-06-01 13:03:43,948 - Loading initial communities from file "./input/succession/initial-communities.txt" ... | ||
| 2022-06-01 13:03:43,958 - Reading initial communities map "./input/succession/initial communities.tif" ... | ||
| 2022-06-01 13:03:44,008 - Loading Magic Harvest extension ... | ||
| 2022-06-01 13:03:44,015 - Magic Harvest : Parameters loaded | ||
| 2022-06-01 13:03:44,015 - Loading Base Harvest extension ... | ||
| 2022-06-01 13:03:44,180 - Registering Data: Harvest.PrescriptionName. | ||
| 2022-06-01 13:03:44,181 - Registering Data: Harvest.TimeOfLastEvent. | ||
| 2022-06-01 13:03:44,181 - Registering Data: Harvest.CohortsDamaged. | ||
| 2022-06-01 13:03:44,242 - Magic Harvest : Initialized | ||
| 2022-06-01 13:03:44,309 - Generating event table... | ||
| 2022-06-01 13:03:44,314 - Generating summary table... | ||
| 2022-06-01 13:03:44,328 - Reading management-area map ./input/disturbances/management.tif ... | ||
| 2022-06-01 13:03:44,340 - Inactive management areas: 0 | ||
| 2022-06-01 13:03:44,340 - Reading stand map ./input/disturbances/stands.tif ... | ||
| 2022-06-01 13:03:44,369 - Using the following extensions ... | ||
| Extension Name Extension Filename | ||
| -------------- ------------------ | ||
| Age-only Succession ./input/succession/succession.txt | ||
| Magic Harvest ./input/disturbances/magic_harvest.txt | ||
| Base Harvest ./input/disturbances/harvest.txt | ||
|
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| 2022-06-01 13:03:44,372 - Current time: 10 | ||
| 2022-06-01 13:03:44,373 - Running Base Harvest ... | ||
| 2022-06-01 13:03:44,791 - Running Age-only Succession ... | ||
| 2022-06-01 13:03:45,212 - Current time: 20 | ||
| 2022-06-01 13:03:45,212 - Running Base Harvest ... | ||
| 2022-06-01 13:03:45,275 - Running Age-only Succession ... | ||
| 2022-06-01 13:03:45,489 - Current time: 30 | ||
| 2022-06-01 13:03:45,489 - Running Base Harvest ... | ||
| 2022-06-01 13:03:46,650 - Running Age-only Succession ... | ||
| 2022-06-01 13:03:46,824 - Current time: 40 | ||
| 2022-06-01 13:03:46,824 - Running Base Harvest ... | ||
| 2022-06-01 13:03:46,921 - Running Age-only Succession ... | ||
| 2022-06-01 13:03:47,051 - Current time: 50 | ||
| 2022-06-01 13:03:47,051 - Running Base Harvest ... | ||
| 2022-06-01 13:03:47,169 - Running Age-only Succession ... | ||
| 2022-06-01 13:03:47,280 - Current time: 60 | ||
| 2022-06-01 13:03:47,280 - Running Base Harvest ... | ||
| 2022-06-01 13:03:47,318 - Running Age-only Succession ... | ||
| 2022-06-01 13:03:47,412 - Current time: 70 | ||
| 2022-06-01 13:03:47,412 - Running Magic Harvest ... | ||
| 2022-06-01 13:03:47,424 - Magic Harvest is now running | ||
| 2022-06-01 13:03:47,424 - Magic Harvest : Printing extensions detected | ||
| 2022-06-01 13:03:47,424 - System.Collections.Generic.List`1[Landis.Core.ExtensionMain] | ||
| 2022-06-01 13:03:47,424 - Magic Harvest | ||
| 2022-06-01 13:03:47,424 - Base Harvest | ||
| 2022-06-01 13:03:47,424 - Magic Harvest : Selected the extension Base Harvest. | ||
| 2022-06-01 13:03:47,424 - Magic Harvest : Launching the python script at ./switchManagementRasterNames.py | ||
| 2022-06-01 13:03:47,425 - Magic Harvest : USING NON-CMD COMMAND | ||
| 2022-06-01 13:03:47,488 - Magic Harvest : Python script has finished running | ||
| 2022-06-01 13:03:47,491 - Internal error occurred within the program: | ||
| 2022-06-01 13:03:47,491 - [A]Landis.Library.HarvestManagement.ManagementAreaDataset cannot be cast to [B]Landis.Library.HarvestManagement.ManagementAreaDataset. Type A originates from 'Landis.Library.HarvestManagement-v4, Version=4.0.0.0, Culture=neutral, PublicKeyToken=null' in the context 'Default' at location 'C:\Program Files\LANDIS-II-v7\extensions\Landis.Library.HarvestManagement-v4.dll'. Type B originates from 'Landis.Library.HarvestManagement-v3, Version=3.0.0.0, Culture=neutral, PublicKeyToken=null' in the context 'Default' at location 'C:\Program Files\LANDIS-II-v7\extensions\Landis.Library.HarvestManagement-v3.dll'. | ||
| 2022-06-01 13:03:47,491 - | ||
| 2022-06-01 13:03:47,491 - Stack trace: | ||
| 2022-06-01 13:03:47,521 - at Landis.Extension.MagicHarvest.PlugIn.Run() | ||
| at Landis.Model.Run(String scenarioPath, IUserInterface ui) | ||
| at Landis.App.Main(String[] args) in D:\CGAProjects\Rob\LANDIS_FINAL\GitHubRepo\Core-Model-v7\Tool-Console\src\App.cs:line 99 |
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| <landisMetadata><extension name="Base Harvest" timeInterval="10"><scenario-replication timeMin="0" timeMax="150" rasterOutCellArea="1" /><outputs><output type="Table" name="EventLog" filePath="./output/harvest/log.csv" visualize="False" MetadataFilePath="Metadata\Base Harvest\EventLog_Metadata.xml" /><output type="Table" name="SummaryLog" filePath="./output/harvest/summarylog.csv" visualize="True" MetadataFilePath="Metadata\Base Harvest\SummaryLog_Metadata.xml" /><output type="Map" name="prescription" filePath="./output/harvest/prescripts-{timestep}.gis" visualize="True" unit="" dataType="Nominal" /></outputs></extension></landisMetadata> |
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Examples/BaseHarvest/Metadata/Base Harvest/EventLog_Metadata.xml
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| <landisMetadata><output><extension name="Base Harvest" metadataFilePath="Base Harvest.xml" /><fields><field name="Time" description="Harvest Year" unit="year" /><field name="ManagementArea" description="Management Area" /><field name="Prescription" description="Prescription Name" /><field name="Stand" description="Stand" /><field name="EventID" description="Event ID" /><field name="StandAge" description="Stand Age" unit="year" /><field name="StandRank" description="Stand Rank" /><field name="NumberOfSites" description="Number of Sites" unit="count" /><field name="HarvestedSites" description="Number of Sites Harvested" unit="count" /><field name="TotalCohortsHarvested" description="Total Number Cohorts Harvested" unit="count" /><field name="CohortsHarvested_abiebals" description="Species Cohorts Harvested by Species" unit="count" /><field name="CohortsHarvested_acerrubr" description="Species Cohorts Harvested by Species" unit="count" /><field name="CohortsHarvested_acersacc" description="Species Cohorts Harvested by Species" unit="count" /><field name="CohortsHarvested_betualle" description="Species Cohorts Harvested by Species" unit="count" /><field name="CohortsHarvested_betupapy" description="Species Cohorts Harvested by Species" unit="count" /><field name="CohortsHarvested_piceglau" description="Species Cohorts Harvested by Species" unit="count" /><field name="CohortsHarvested_pinubank" description="Species Cohorts Harvested by Species" unit="count" /><field name="CohortsHarvested_pinuresi" description="Species Cohorts Harvested by Species" unit="count" /><field name="CohortsHarvested_pinustro" description="Species Cohorts Harvested by Species" unit="count" /><field name="CohortsHarvested_poputrem" description="Species Cohorts Harvested by Species" unit="count" /><field name="CohortsHarvested_querelli" description="Species Cohorts Harvested by Species" unit="count" /><field name="CohortsHarvested_quermacr" description="Species Cohorts Harvested by Species" unit="count" /><field name="CohortsHarvested_querrubr" description="Species Cohorts Harvested by Species" unit="count" /><field name="CohortsHarvested_tiliamer" description="Species Cohorts Harvested by Species" unit="count" /><field name="CohortsHarvested_tsugcana" description="Species Cohorts Harvested by Species" unit="count" /></fields></output></landisMetadata> |
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Examples/BaseHarvest/Metadata/Base Harvest/SummaryLog_Metadata.xml
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| <landisMetadata><output><extension name="Base Harvest" metadataFilePath="Base Harvest.xml" /><fields><field name="Time" description="Simulation Year" unit="year" /><field name="ManagementArea" description="Management Area" /><field name="Prescription" description="Prescription Name" /><field name="HarvestedSites" description="Harvested Sites" unit="count" /><field name="CohortsHarvested_abiebals" description="Number of Cohorts Harvested by Species" unit="count" /><field name="CohortsHarvested_acerrubr" description="Number of Cohorts Harvested by Species" unit="count" /><field name="CohortsHarvested_acersacc" description="Number of Cohorts Harvested by Species" unit="count" /><field name="CohortsHarvested_betualle" description="Number of Cohorts Harvested by Species" unit="count" /><field name="CohortsHarvested_betupapy" description="Number of Cohorts Harvested by Species" unit="count" /><field name="CohortsHarvested_piceglau" description="Number of Cohorts Harvested by Species" unit="count" /><field name="CohortsHarvested_pinubank" description="Number of Cohorts Harvested by Species" unit="count" /><field name="CohortsHarvested_pinuresi" description="Number of Cohorts Harvested by Species" unit="count" /><field name="CohortsHarvested_pinustro" description="Number of Cohorts Harvested by Species" unit="count" /><field name="CohortsHarvested_poputrem" description="Number of Cohorts Harvested by Species" unit="count" /><field name="CohortsHarvested_querelli" description="Number of Cohorts Harvested by Species" unit="count" /><field name="CohortsHarvested_quermacr" description="Number of Cohorts Harvested by Species" unit="count" /><field name="CohortsHarvested_querrubr" description="Number of Cohorts Harvested by Species" unit="count" /><field name="CohortsHarvested_tiliamer" description="Number of Cohorts Harvested by Species" unit="count" /><field name="CohortsHarvested_tsugcana" description="Number of Cohorts Harvested by Species" unit="count" /></fields></output></landisMetadata> |
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| >> HARVEST MODULE PARAMETER FILE | ||
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| >> If a parameter requires SPECIES information, it must be followed by a | ||
| >> table listing a species name, followed by a list of parameters, | ||
| >> as outlined in the documentation. | ||
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| >>------------------------------------------------------------------------ | ||
| >> TYPE OF DATA | ||
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| LandisData "Base Harvest" | ||
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| >>------------------------------------------------------------------------ | ||
| >> TIMESTEP | ||
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| Timestep 10 | ||
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| >>------------------------------------------------------------------------ | ||
| >> MANAGEMENT AREAS: the .gis file which defines the management areas. | ||
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| ManagementAreas "./input/disturbances/management.tif" | ||
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| >>------------------------------------------------------------------------ | ||
| >> STANDS: the .gis file which defines the stands. A stand can belong to | ||
| >> one and only one management area. | ||
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| Stands "./input/disturbances/stands.tif" | ||
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| >>------------------------------------------------------------------------ | ||
| >> PRESCRIPTIONS | ||
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| Prescription CPRS | ||
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| >> STAND RANKING: | ||
| StandRanking MaxCohortAge | ||
| >> STAND QUALIFICATION FOR CUTTING: | ||
| MinimumAge 20 | ||
| >> SITE SELECTION: | ||
| >> Minimum Size Maximum Size | ||
| >> ---------- ---------- | ||
| SiteSelection PartialStandSpread 1 10 | ||
| >> COHORT REMOVAL METHOD: | ||
| CohortsRemoved ClearCut | ||
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| Prescription Shelterwood | ||
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| >> STAND RANKING: | ||
| StandRanking MaxCohortAge | ||
| >> STAND QUALIFICATION FOR CUTTING: | ||
| MinimumAge 20 | ||
| >> SITE SELECTION: | ||
| >> Minimum Size Maximum Size | ||
| >> ---------- ---------- | ||
| SiteSelection PartialStandSpread 1 10 | ||
| CohortsRemoved SpeciesList | ||
| >> Species Cohorts removed | ||
| >> ------- --------------- | ||
| abiebals 1/2 | ||
| acerrubr 1/2 | ||
| acersacc 1/2 | ||
| betualle 1/2 | ||
| betupapy 1/2 | ||
| piceglau 1/2 | ||
| pinubank 1/2 | ||
| pinuresi 1/2 | ||
| pinustro 1/2 | ||
| poputrem 1/2 | ||
| querelli 1/2 | ||
| quermacr 1/2 | ||
| querrubr 1/2 | ||
| tiliamer 1/2 | ||
| tsugcana 1/2 | ||
| SingleRepeat 20 | ||
| CohortsRemoved ClearCut | ||
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| Prescription CPI-CP | ||
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| >> STAND RANKING: | ||
| StandRanking MaxCohortAge | ||
| >> STAND QUALIFICATION FOR CUTTING: | ||
| MinimumAge 20 | ||
| >> SITE SELECTION: | ||
| >> Minimum Size Maximum Size | ||
| >> ---------- ---------- | ||
| SiteSelection PartialStandSpread 1 10 | ||
| >> COHORT REMOVAL METHOD: | ||
| CohortsRemoved SpeciesList | ||
| >> Species Cohorts removed | ||
| >> ------- --------------- | ||
| abiebals 1/3 | ||
| acerrubr 1/3 | ||
| acersacc 1/3 | ||
| betualle 1/3 | ||
| betupapy 1/3 | ||
| piceglau 1/3 | ||
| pinubank 1/3 | ||
| pinuresi 1/3 | ||
| pinustro 1/3 | ||
| poputrem 1/3 | ||
| querelli 1/3 | ||
| quermacr 1/3 | ||
| querrubr 1/3 | ||
| tiliamer 1/3 | ||
| tsugcana 1/3 | ||
| MultipleRepeat 30 | ||
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| >>----------------------------------------------------------------- | ||
| >> HARVEST IMPLEMENTATION TABLE | ||
| >> The following table defines which management areas (defined in the | ||
| >> ManagementArea file) are treated by which prescription(s). | ||
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| HarvestImplementations | ||
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| >> Mgmt Area Prescription Harvest Area Begin Time End Time | ||
| >> --------- ------------ ------------ ---------- -------- | ||
| 1 CPRS 2.5% | ||
| >> 1 Shelterwood 0.5% | ||
| >> 1 CPI-CP 0.5% | ||
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| >>------------------------------------------------------------------------ | ||
| >> OUTPUT FILES | ||
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| PrescriptionMaps ./output/harvest/prescripts-{timestep}.gis | ||
| EventLog ./output/harvest/log.csv | ||
| SummaryLog ./output/harvest/summarylog.csv | ||
| >>------------------------------------------------------------------------ |
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